Detail information of GWHGAAEX016639/evm.TU.scaffold_78.68
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|604328088|gb|EYU33756.1| | 6.31E-108 | hypothetical protein MIMGU_mgv1a019661mg [Erythranthe guttata] |
| Swissprot | tr|O65590|WRK34_ARATH | 7.00E-83 | Probable WRKY transcription factor 34 |
| trEMBL | tr|M0SK77|M0SK77_MUSAM | 5.00E-109 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P01600_001} |
| TAIR | AT4G26440 | 2.00E-82 | WRKY DNA-binding protein 34 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000086 | 1256732 | 1261938 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016639
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF03106.14 | WRKY | 209 | 265 | 4.80E-24 |
| PF03106.14 | WRKY | 344 | 401 | 3.10E-25 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K13424 | WRKY33 | MAPK signaling pathway - plant | map04016 |
| Plant-pathogen interaction | map04626 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.160 |
| SRR2545915 | Juvenile tuber | 0.430 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 2.180 |
| SRR5643514 | five period of Gastrodia elata | 1.600 | |
| SRR5643515 | five period of Gastrodia elata | 2.590 | |
| SRR5643524 | five period of Gastrodia elata | 2.340 | |
| SRR5643525 | five period of Gastrodia elata | 3.420 | |
| SRR5643528 | five period of Gastrodia elata | 6.230 | |
| SRR5643658 | five period of Gastrodia elata | 1.500 | |
| SRR5643659 | five period of Gastrodia elata | 2.110 | |
| SRR5643660 | five period of Gastrodia elata | 2.010 | |
| SRR5643661 | five period of Gastrodia elata | 2.660 | |
| SRR5643662 | five period of Gastrodia elata | 3.560 | |
| SRR5643663 | five period of Gastrodia elata | 2.000 | |
| SRR5643664 | five period of Gastrodia elata | 2.390 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 1.750 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 2.020 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 1.610 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 1.370 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.260 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.040 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 1.000 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.460 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1.980 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 1.120 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 1.300 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 1.300 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 1.32 |
| Juven | Juvenile tuber | 0.73 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 3.03 | |
| Mother_Juven | Mother tuber of Juvenile | 0.85 |