Gene detail

Detail information of GWHGAAEX016644/evm.TU.scaffold_78.73

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG2261	Polycomb enhancer protein, EPC
nr	gi\|743807697\|ref\|XP_010928160.1\|	PREDICTED: enhancer of polycomb-like protein 1 [Elaeis guineensis]
trEMBL	tr\|D7TB57\|D7TB57_VITVI	Enhancer of polycomb-like protein {ECO:0000256\|RuleBase:RU361124}
TAIR	AT1G79020	Enhancer of polycomb-like transcription factor protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000086	1387677	1430415	-

Transcript Sequence
>GWHTAAEX016644 AGAAGAAGAAGAAGAAGGAGAAGACCTTCTTTTCTCCCAAACACATCTCCTTGCTTTTCCTCTCTTCCCTCCCCTCTCCCTCCTTTTAAACCCTAGACCTCCAATTCGCTAAACCCTAGACCTCCAATTCGCCCCATTTTCAATCCCAGCTCTCAACCCTCATCCCGCCTAATCGGTCACAGCTGCGCGTCCCGCTCGTGAACTAATTGTCCCACCAACTCTCATAACAGTTCGAATTATTATGTTAGCTCTTCGGCACTGTGGGAAAATTTGAAAAGAACTGCCCGTTGCTTAATTTTTATTTTCAAAACTAGGGCTTCGAAGTTCCTTTGTCTTGTTCTGCGCTGATCTTCCATGAATTATGGGGTCTCGTTTGCAGAGTTCTGAACTTCTTGTGTTTGATGATTCGGGTTGTGCGCTTGCTTAGCAGCTCGTCCTTCCAGTTTGGTCAGCTGTGAGAGATTTGGTTCGAGTGGCTTCGAATGCGGACCTTGGGCGTTTGTGATTGCATGGGTGGGGCTTGAGCAGACATGAGTAGGCTGTCATTCAGGCCACGCCCACTTGACATTCATAAGAAACTTCCTATTATTAAGTCTGTGAAGGATTTTGATGATGATGAAGTGCCAATCGCTGCTGCTGCCACCCGGAACTCGCAACTGCTACGAATTGCAGCCGAGACTGACAATGAGGTACATCACATTACGACTAAAAAATCTGCATCTGAAATACCTACACCACAGTATAATGTTGTGGAGACATATGAACGAGATTATTCCAGAACTTTTAGTCAAACCTCATCTTATTTGCGTGGAAGAGGAGCCAGGGGAGAGATTAGTGATTTTGTAGAGTATGATATCGACAATGAGGATGAGGATTGGCTTCAAAATTTCAATAATGAAAGGAGAATTCTTCCTCATGAAAAGCTCGAAAGTTTACTTTTTAAGTTAGAGGTTTTGGATCATAAAGCACGGGAGAGATCAGGAGCGTTGCAACCTACCTTTATTTCTCCTGTTCCTGTCCTTCTGCAGCCTGATGCTGCAACTGAGGCCTTGCAGGGACTCTCTTTGCGAAATTCAACTATACAATCTGTATATTACTATTGGAAATCAAAGCGAGAACGTTGGCAGAAACCAATACTAAGACGATTACAGCCTCCCCCACCACTTAATGATACAAATCCTTACAACGTTTTCAGACCAAGGGAAAAAGCTCATCGTCTTCATACAAGGAGGATGCAAAGGCGGGAGAACAATGTCCAGTCTTTTGAGAAACTACGCCAGGTTAGGCGCAACTTGGGCCAGGCAAAAACAGTTTTGGAAGCTTTAATTAAGAGAGAAGAAACCAAGCGCCTACTTATGGAAAGTATTGTCAATCTTCAGCGGATTCAGATGAAGTATAAGCATGAGGCACAGCTTGTTGACGATGGAATGGCAATGTTCGGTTTCCAATCAAATTCGCATAAAATAGGTTCCAGTGAGGACGATTTTATAGACTCAGATGATCCCAGAACAGTCCGGTCACATATGCGACCGATGCAAAGTCCCAAGCTCGTCTTGATTTCTAGAAGTCACATAAAGCGTCACTTGAAACGAGGGGCTTTGTCTCATAGATGGTCGCACGGGAGGGACTTGCATGAGCCCGTTCTCCTATTCACAAGACCTCTAGACCCTGTAAAACTGGCTGCTGCCGGCATCGTCCCGCCATCGTTAGATTCCCCAGTTGAGAATGGCTCGGCACCGCCGGCCTGTCGGTTCCGCGGCAGGATCGGTCGGGGTGGCCGCATTGTTTTTGACCGCTGGAATCCGCTCCTTCAGTCTCCGATCGGCGGCCTCGAAAGCATCGACCACGTCCCTCCGAACGACCAGCCTCCCCAGCCTAACGGCTGAATGGTTCTCGTGTCTTTTTCTCTTTCAGATGCGGCAGCTAGAGCTCTGTGCTCAGGAAGAGATCTCTCTGCCCTGATGCCTTTCTTCCCTTCCCTGTTAGGTTTTGGGATTTCATTTATTTATATGCATCCCTTCTGGGCAAAAGAGCAGAAGATCAAAAGCTTTGAATTTGATGAGCAGCACAGCATAATCATCATTGGCAGAGGCCAGGATTTCCACTATTGTGGGTCTTTGTATACAGAAAGATTTGAAGTGGGCAGAGAGCAGGATTAGAATGCCCCCCTTTTTTTTCTTTTGATTTTTTTTCGTGTTAAATCTTTAATTCTTATTTCAGTCACATTTACCACTAATGAGCCTCAAAATTTGTAATCTGTATTACAATGGTTTAGATTGTAGCAGTCAGTCCATTTTTAGGGCACCTTAACCTTTTTCTTTTCTTTATTTTTTTTGTTAAATTTAGTGATCAATTGATGAGAAGCATAAATGTGCTTAAATTCTTGATAAAATGGAAGATTTGATGAGTTGCTGGTTATCAATTGAATATAAGGTTCTTC

Network for GWHGAAEX016644

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10513.8	EPL1	8	139	5.10E-13

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.400
SRP064423	SRR2545915	Juvenile tuber	4.790
SRP108465	SRR5643513	five period of Gastrodia elata	6.220
	SRR5643514	five period of Gastrodia elata	5.340
	SRR5643515	five period of Gastrodia elata	5.980
	SRR5643524	five period of Gastrodia elata	5.640
	SRR5643525	five period of Gastrodia elata	6.750
	SRR5643528	five period of Gastrodia elata	4.870
	SRR5643658	five period of Gastrodia elata	4.670
	SRR5643659	five period of Gastrodia elata	6.650
	SRR5643660	five period of Gastrodia elata	6.270
	SRR5643661	five period of Gastrodia elata	6.020
	SRR5643662	five period of Gastrodia elata	6.730
	SRR5643663	five period of Gastrodia elata	4.890
	SRR5643664	five period of Gastrodia elata	5.510
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.730
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.930
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.690
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.820
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.160
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	6.270
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	8.150
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.630
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.370
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.300
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.310
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.310
SRP279888	Gastro	Gastrodia elata tuber	8.38
	Juven	Juvenile tuber	7.79
	Mother_Gastro	Mother tuber of Gastrodia elata	9.39
	Mother_Juven	Mother tuber of Juvenile	5.99