Detail information of GWHGAAEX016650/evm.TU.scaffold_78.79


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG05110Ankyrin repeat protein
nrgi|743765938|ref|XP_010913196.1|0PREDICTED: BTB/POZ domain-containing protein At2g04740 isoform X2 [Elaeis guineensis]
Swissprottr|Q9SJ85|Y2474_ARATH0BTB/POZ domain-containing protein At2g04740
trEMBLtr|M0SBL3|M0SBL3_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P03950_001}
TAIRAT2G047400ankyrin repeat family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008615512271570083+
Transcript Sequence

Network for GWHGAAEX016650

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13637.5Ank_434835.00E-06
PF00651.30BTB1582582.50E-14
PF00651.30BTB3084173.40E-16
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTRAF
Ubiquitin FamilyBTB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.450
SRR2545915Juvenile tuber6.410
SRP108465SRR5643513five period of Gastrodia elata12.460
SRR5643514five period of Gastrodia elata11.170
SRR5643515five period of Gastrodia elata11.800
SRR5643524five period of Gastrodia elata11.230
SRR5643525five period of Gastrodia elata11.540
SRR5643528five period of Gastrodia elata13.060
SRR5643658five period of Gastrodia elata13.380
SRR5643659five period of Gastrodia elata13.800
SRR5643660five period of Gastrodia elata17.030
SRR5643661five period of Gastrodia elata14.190
SRR5643662five period of Gastrodia elata14.530
SRR5643663five period of Gastrodia elata13.610
SRR5643664five period of Gastrodia elata14.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.480
SRR6049655Rhizomagastrodiae_C368-T10_good_114.180
SRR6049656Rhizomagastrodiae_C368-T07_good_19.180
SRR6049657Rhizomagastrodiae_C368-T07_good_115.260
SRR6049658Rhizomagastrodiae_C368-T04_good_112.740
SRR6049659Rhizomagastrodiae_C368-T04_good_114.650
SRR6049660Rhizomagastrodiae_C368-T01_good_110.380
SRR6049661Rhizomagastrodiae_C368-T04_good_110.440
SRR6049662Rhizomagastrodiae_C368-T01_good_19.500
SRR6049663Rhizomagastrodiae_C368-T01_good_18.850
SRR6049664Rhizomagastrodiae_C368-T10_good_110.870
SRR6049665Rhizomagastrodiae_C368-T10_good_110.870
SRP279888GastroGastrodia elata tuber 15.77
JuvenJuvenile tuber18.22
Mother_GastroMother tuber of Gastrodia elata 15.95
Mother_JuvenMother tuber of Juvenile 16.69