Detail information of GWHGAAEX016672/evm.TU.scaffold_78.103


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|697096097|ref|XP_009614696.1|2.23E-19PREDICTED: LOW QUALITY PROTEIN: 18 kDa seed maturation protein-like [Nicotiana tomentosiformis]
Swissprottr|Q01417|PM1_SOYBN2.00E-1418 kDa seed maturation protein
trEMBLtr|M4GW02|M4GW02_ELAGV1.00E-19Late embryogenesis abundant group 4 {ECO:0000313|EMBL:AFG26320.1}
TAIRAT5G067602.00E-19Late Embryogenesis Abundant 4-5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008618582421858736-
Transcript Sequence

Network for GWHGAAEX016672

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03760.14LEA_11712.80E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0009793Biological Processembryo development ending in seed dormancy

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms31.100
SRR2545915Juvenile tuber115.810
SRP108465SRR5643513five period of Gastrodia elata6.940
SRR5643514five period of Gastrodia elata24.430
SRR5643515five period of Gastrodia elata14.800
SRR5643524five period of Gastrodia elata11.640
SRR5643525five period of Gastrodia elata102.750
SRR5643528five period of Gastrodia elata43.780
SRR5643658five period of Gastrodia elata88.500
SRR5643659five period of Gastrodia elata38.430
SRR5643660five period of Gastrodia elata14.410
SRR5643661five period of Gastrodia elata69.170
SRR5643662five period of Gastrodia elata8.860
SRR5643663five period of Gastrodia elata5.930
SRR5643664five period of Gastrodia elata30.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.260
SRR6049655Rhizomagastrodiae_C368-T10_good_120.720
SRR6049656Rhizomagastrodiae_C368-T07_good_114.290
SRR6049657Rhizomagastrodiae_C368-T07_good_16.930
SRR6049658Rhizomagastrodiae_C368-T04_good_110.030
SRR6049659Rhizomagastrodiae_C368-T04_good_111.780
SRR6049660Rhizomagastrodiae_C368-T01_good_19.750
SRR6049661Rhizomagastrodiae_C368-T04_good_115.490
SRR6049662Rhizomagastrodiae_C368-T01_good_112.700
SRR6049663Rhizomagastrodiae_C368-T01_good_113.270
SRR6049664Rhizomagastrodiae_C368-T10_good_117.270
SRR6049665Rhizomagastrodiae_C368-T10_good_117.270
SRP279888GastroGastrodia elata tuber 31.91
JuvenJuvenile tuber10.43
Mother_GastroMother tuber of Gastrodia elata 35.90
Mother_JuvenMother tuber of Juvenile 57.11