Detail information of GWHGAAEX016673/evm.TU.scaffold_78.104


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|15240144|ref|NP_196294.1|7.37E-21late embryogenesis abundant protein 4-5 [Arabidopsis thaliana]
Swissprottr|Q01417|PM1_SOYBN2.00E-1718 kDa seed maturation protein
trEMBLtr|Q9FG31|Q9FG31_ARATH3.00E-21Putative late embryogenesis abundant protein LEA {ECO:0000313|EMBL:AAK93613.1}
TAIRAT5G067601.00E-22Late Embryogenesis Abundant 4-5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008618659481866872-
Transcript Sequence

Network for GWHGAAEX016673

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03760.14LEA_11717.30E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0009793Biological Processembryo development ending in seed dormancy

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms79.850
SRR2545915Juvenile tuber355.270
SRP108465SRR5643513five period of Gastrodia elata34.290
SRR5643514five period of Gastrodia elata42.980
SRR5643515five period of Gastrodia elata88.100
SRR5643524five period of Gastrodia elata23.260
SRR5643525five period of Gastrodia elata214.550
SRR5643528five period of Gastrodia elata141.770
SRR5643658five period of Gastrodia elata612.480
SRR5643659five period of Gastrodia elata187.970
SRR5643660five period of Gastrodia elata142.870
SRR5643661five period of Gastrodia elata265.810
SRR5643662five period of Gastrodia elata74.910
SRR5643663five period of Gastrodia elata41.200
SRR5643664five period of Gastrodia elata146.100
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.010
SRR6049655Rhizomagastrodiae_C368-T10_good_121.310
SRR6049656Rhizomagastrodiae_C368-T07_good_110.410
SRR6049657Rhizomagastrodiae_C368-T07_good_17.860
SRR6049658Rhizomagastrodiae_C368-T04_good_10.690
SRR6049659Rhizomagastrodiae_C368-T04_good_12.240
SRR6049660Rhizomagastrodiae_C368-T01_good_16.490
SRR6049661Rhizomagastrodiae_C368-T04_good_11.020
SRR6049662Rhizomagastrodiae_C368-T01_good_13.410
SRR6049663Rhizomagastrodiae_C368-T01_good_12.950
SRR6049664Rhizomagastrodiae_C368-T10_good_19.200
SRR6049665Rhizomagastrodiae_C368-T10_good_19.200
SRP279888GastroGastrodia elata tuber 19.04
JuvenJuvenile tuber14.59
Mother_GastroMother tuber of Gastrodia elata 79.48
Mother_JuvenMother tuber of Juvenile 102.53