Gene detail

Detail information of GWHGAAEX016674/evm.TU.scaffold_78.105

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|307595626\|ref\|YP_003901943.1\|	1.00E-25	bis(5'-nucleosyl)-tetraphosphatase [Vulcanisaeta distributa DSM 14429]
KOG	KOG0376	0	Serine-threonine phosphatase 2A, catalytic subunit
nr	gi\|743821881\|ref\|XP_010932152.1\|	0	PREDICTED: serine/threonine-protein phosphatase 7 [Elaeis guineensis]
Swissprot	tr\|Q9FN02\|PPP7_ARATH	0	Serine/threonine-protein phosphatase 7
trEMBL	tr\|M0SBI6\|M0SBI6_MUSAM	0	Serine/threonine-protein phosphatase {ECO:0000256\|RuleBase:RU004273}
TAIR	AT5G63870	0	serine/threonine phosphatase 7

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000086	1870825	1903139	-

Transcript Sequence
>GWHTAAEX016674 TATCAATCTTTTTAATTAGTAGCTATCATTCATTGCAAGTGCTTAGAGTTTGGGTAGGTCTTGTAGATAAGTGATGGAAAGCGTAGACACGAGCAAAGCTTCCTTTTTATCGGCTCAGTGTTCCCCTTCTTTATAAAAACAACCTTCTTTTTCCAGCCTAAATGGCACCACAGAACTCTCCGGCGCTCAATCACAACGAACCTGATCCACCGTCTTCATCCCCAAAGATTCCCATCTCATGGCCCCCCGACGGATCTCTAACGCGAGAGTGGATCGATCACCTCACGGCCGCCGTCGATTGGTCCTCGAGGAACCTTCGTCCATCCGATCTTCCATCCGTTCTTCCATTCGAAGTTGTGCAGCAGTTGATTCTCACGGCTTCGGGTATCCTTCATCACGAGCCGAACTGCGTTCAGATCGATCCTTCTGCCGGAGATGAACTAGGCGTTGGAGGCGCTAGGGTTGTGGTAGTGGGCGATGTCCACGGGCAGCTTCACGATGTTTTGTTTCTTATGCGCGATGCGGGATTTCCCTCGGAGGACCGCTTCTTCGTGTTTAATGGTGATTATGTTGATAGAGGGGCATGGGGTCTGGAGACTTTTCTGCTGTTGCTTGCCTGGAAGGTCTTCTTGCCACATCGAGTGTTTCTTCTTCGTGGCAATCATGAATCTAAATATTGCACATCAGTGTATGGATTTGAGAAAGAGGTGATGGACAAGTTTGAAAACCAGGGGCAGCATGTGTATAGGAAATGCCTAAGGTGCTTCGAAGGCCTTCCGTTGGTTGCTATCATAGCAAGCCATGTATATTCTGCCCATGGAGGGCTTTTTCGCAGTGTGTCTACGGCTCCTTCGAAGAGGTTTAAAGGGAAAAAGGGCACAAAGATGAAATGCTTCACAGAAAGTAGTTCATTAAAGCTTGGTACCCTGGAGGAACTTTCTAGAGCGCGTAGAACTGTTCTTAATCCTCCATGGGAAGGTTCGAATCTTATTCCTGGAGATGTGCTATGGTCAGATCCTTCATCTAACATGGGATTGTCTCCAAATGAAGAGCGCGGTATTGGTTTATTATGGGGGCCGGATTGCACAGAGAATTTCCTTTCAAAAAATAAGTTAAAGCTGATCATTAGGTCTCATGAAGGTCCTGATGCTCGAGAAAAAAGGCATGATATGAAGGGTATTCGGGATGGATATACAATTGATCACGAGGTTGCTTCTGGAAAGCTGATTACCCTTTTCAGTGCCCCAGATTACCCTCAGTTTCAGGATGCTGATGTACGATACAACAATCGGGGAGCATATATCGTATTGAAACCGCCAGGTTTTTCCATTCCTGAGTTTCATACCTTTGAAGCTGTCAAACCACGACCTCAGGTCAATGCATATTATAATTTTAAAGAGGTAATTGATTCTGATGATGAGCTCGATTTAGAGTCCATGGATTAGCGCAGTAAGCAACTGAAATTTTATTTTTATAATTATTAGTAATTCCATTTCAGCCCTAGTTTGTATATTTGTACTATTTAAATATACATTTCTAGCACTGCAAAAGTTAATGCAAGGGGGGTTATTGTTTTGATGATCAGTCAAGCATGCTAAATTTTTTTCTATAAACAATTATATATTTTATAACATTTGTATTTTTTGTAAATTATTCATTTCATTAATAGTTTGAATTATTTATCTCATACCTCTGAGCTGTCTCGTGTCTGAAATTTTGTATATATATTTATGTTTTTCTCAATAAAAGCATTATGAAACGG

Network for GWHGAAEX016674

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00149.27	Metallophos	100	328	3.70E-37

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K04460	PPP5C	MAPK signaling pathway	map04010

Gene Ontology

GO term	Ontology	Name
GO:0016787	Molecular Function	hydrolase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	14.810
SRP064423	SRR2545915	Juvenile tuber	11.900
SRP108465	SRR5643513	five period of Gastrodia elata	12.050
	SRR5643514	five period of Gastrodia elata	11.480
	SRR5643515	five period of Gastrodia elata	14.080
	SRR5643524	five period of Gastrodia elata	13.140
	SRR5643525	five period of Gastrodia elata	32.210
	SRR5643528	five period of Gastrodia elata	29.220
	SRR5643658	five period of Gastrodia elata	43.830
	SRR5643659	five period of Gastrodia elata	11.350
	SRR5643660	five period of Gastrodia elata	10.370
	SRR5643661	five period of Gastrodia elata	10.770
	SRR5643662	five period of Gastrodia elata	11.890
	SRR5643663	five period of Gastrodia elata	12.680
	SRR5643664	five period of Gastrodia elata	10.570
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	10.990
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.970
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	13.550
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	10.960
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	13.830
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	14.400
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	11.510
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.420
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.680
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.680
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	15.290
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	15.290
SRP279888	Gastro	Gastrodia elata tuber	14.49
	Juven	Juvenile tuber	13.75
	Mother_Gastro	Mother tuber of Gastrodia elata	24.56
	Mother_Juven	Mother tuber of Juvenile	30.04