Detail information of GWHGAAEX016678/evm.TU.scaffold_78.109


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743804928|ref|XP_010927311.1|5.45E-28PREDICTED: jacalin-related lectin 3-like [Elaeis guineensis]
Swissprottr|Q9SSM3|JAL19_ARATH7.00E-09Jacalin-related lectin 19
trEMBLtr|M0SGE2|M0SGE2_MUSAM8.00E-14Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P20760_001}
TAIRAT1G730402.00E-08Mannose-binding lectin superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008619591721960850+
Transcript Sequence

Network for GWHGAAEX016678

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01419.16Jacalin261631.50E-13
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.420
SRR2545915Juvenile tuber25.130
SRP108465SRR5643513five period of Gastrodia elata3.850
SRR5643514five period of Gastrodia elata3.790
SRR5643515five period of Gastrodia elata4.700
SRR5643524five period of Gastrodia elata3.050
SRR5643525five period of Gastrodia elata77.980
SRR5643528five period of Gastrodia elata57.980
SRR5643658five period of Gastrodia elata15.210
SRR5643659five period of Gastrodia elata6.250
SRR5643660five period of Gastrodia elata8.740
SRR5643661five period of Gastrodia elata7.910
SRR5643662five period of Gastrodia elata7.620
SRR5643663five period of Gastrodia elata8.580
SRR5643664five period of Gastrodia elata7.130
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.550
SRR6049655Rhizomagastrodiae_C368-T10_good_19.050
SRR6049656Rhizomagastrodiae_C368-T07_good_111.490
SRR6049657Rhizomagastrodiae_C368-T07_good_17.730
SRR6049658Rhizomagastrodiae_C368-T04_good_110.150
SRR6049659Rhizomagastrodiae_C368-T04_good_113.760
SRR6049660Rhizomagastrodiae_C368-T01_good_18.780
SRR6049661Rhizomagastrodiae_C368-T04_good_112.310
SRR6049662Rhizomagastrodiae_C368-T01_good_114.780
SRR6049663Rhizomagastrodiae_C368-T01_good_112.860
SRR6049664Rhizomagastrodiae_C368-T10_good_114.010
SRR6049665Rhizomagastrodiae_C368-T10_good_114.010
SRP279888GastroGastrodia elata tuber 15.83
JuvenJuvenile tuber8.26
Mother_GastroMother tuber of Gastrodia elata 7.87
Mother_JuvenMother tuber of Juvenile 5.19