Detail information of GWHGAAEX016686/evm.TU.scaffold_78.119
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2720 | 4.00E-40 | Predicted hydrolase (HIT family) |
| nr | gi|672141229|ref|XP_008794437.1| | 1.01E-129 | PREDICTED: GDP-L-galactose phosphorylase 1-like isoform X1 [Phoenix dactylifera] |
| Swissprot | tr|Q8RWE8|GGAP1_ARATH | 7.00E-44 | GDP-L-galactose phosphorylase 1 |
| trEMBL | tr|M0STT1|M0STT1_MUSAM | 4.00E-105 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P31690_001} |
| TAIR | AT4G26850 | 4.00E-40 | mannose-1-phosphate guanylyltransferase (GDP)s;GDP-galactose:mannose-1-phosphate guanylyltransferases;GDP-galactose:glucose-1-phosphate guanylyltransferases;GDP-galactose:myoinositol-1-phosphate guanylyltransferases;glucose-1-phosphate guanylyltransferase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000086 | 2133948 | 2149119 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016686
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K14190 | VTC2_5 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Ascorbate and aldarate metabolism | map00053 |
Gene Ontology
| GO term | Ontology | Name |
|---|
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 18.930 |
| SRR2545915 | Juvenile tuber | 18.340 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 14.640 |
| SRR5643514 | five period of Gastrodia elata | 15.400 | |
| SRR5643515 | five period of Gastrodia elata | 19.320 | |
| SRR5643524 | five period of Gastrodia elata | 21.540 | |
| SRR5643525 | five period of Gastrodia elata | 23.220 | |
| SRR5643528 | five period of Gastrodia elata | 33.800 | |
| SRR5643658 | five period of Gastrodia elata | 26.980 | |
| SRR5643659 | five period of Gastrodia elata | 13.150 | |
| SRR5643660 | five period of Gastrodia elata | 14.890 | |
| SRR5643661 | five period of Gastrodia elata | 13.540 | |
| SRR5643662 | five period of Gastrodia elata | 19.590 | |
| SRR5643663 | five period of Gastrodia elata | 18.220 | |
| SRR5643664 | five period of Gastrodia elata | 14.210 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 25.970 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 18.790 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 31.010 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 23.480 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 24.050 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 22.930 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 23.040 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 25.720 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 24.830 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 20.880 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 28.410 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 28.410 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 21.07 |
| Juven | Juvenile tuber | 14.74 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 33.26 | |
| Mother_Juven | Mother tuber of Juvenile | 28.35 |