Detail information of GWHGAAEX016692/evm.TU.scaffold_78.125


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|298345771|ref|YP_003718458.1|3.00E-18hypothetical protein HMPREF0573_10645 [Mobiluncus curtisii ATCC 43063]
KOGKOG11870Serine/threonine protein kinase
nrgi|672181655|ref|XP_008811054.1|0PREDICTED: C-type lectin receptor-like tyrosine-protein kinase At1g52310 [Phoenix dactylifera]
Swissprottr|Q9C823|Y1523_ARATH0C-type lectin receptor-like tyrosine-protein kinase At1g52310 (Precursor)
trEMBLtr|M0RMC2|M0RMC2_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P28980_001}
TAIRAT1G523100protein kinase family protein / C-type lectin domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008621887092202439-
Transcript Sequence

Network for GWHGAAEX016692

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00059.20Lectin_C531663.70E-12
PF07714.16Pkinase_Tyr2705202.60E-36
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_C-LEC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.310
SRR2545915Juvenile tuber19.520
SRP108465SRR5643513five period of Gastrodia elata26.710
SRR5643514five period of Gastrodia elata22.410
SRR5643515five period of Gastrodia elata29.460
SRR5643524five period of Gastrodia elata31.710
SRR5643525five period of Gastrodia elata18.120
SRR5643528five period of Gastrodia elata19.260
SRR5643658five period of Gastrodia elata17.580
SRR5643659five period of Gastrodia elata24.200
SRR5643660five period of Gastrodia elata26.480
SRR5643661five period of Gastrodia elata23.400
SRR5643662five period of Gastrodia elata24.330
SRR5643663five period of Gastrodia elata21.700
SRR5643664five period of Gastrodia elata23.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.010
SRR6049655Rhizomagastrodiae_C368-T10_good_118.420
SRR6049656Rhizomagastrodiae_C368-T07_good_127.620
SRR6049657Rhizomagastrodiae_C368-T07_good_129.480
SRR6049658Rhizomagastrodiae_C368-T04_good_124.570
SRR6049659Rhizomagastrodiae_C368-T04_good_127.350
SRR6049660Rhizomagastrodiae_C368-T01_good_128.370
SRR6049661Rhizomagastrodiae_C368-T04_good_126.180
SRR6049662Rhizomagastrodiae_C368-T01_good_126.980
SRR6049663Rhizomagastrodiae_C368-T01_good_128.230
SRR6049664Rhizomagastrodiae_C368-T10_good_127.290
SRR6049665Rhizomagastrodiae_C368-T10_good_127.290
SRP279888GastroGastrodia elata tuber 19.67
JuvenJuvenile tuber26.68
Mother_GastroMother tuber of Gastrodia elata 19.52
Mother_JuvenMother tuber of Juvenile 32.58