Gene detail

Detail information of GWHGAAEX016699/evm.TU.scaffold_78.133

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743777484\|ref\|XP_010919176.1\|	0	PREDICTED: myosin-9-like isoform X4 [Elaeis guineensis]
trEMBL	tr\|M0SYA4\|M0SYA4_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P13750_001}
TAIR	AT2G45460	5.00E-21	SMAD/FHA domain-containing protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000086	2505741	2525284	-

Transcript Sequence
>GWHTAAEX016699 ATGGCGGTTGAAGTCCCCGTCGATCGATTGCCGGATCCCTCCACCGCGGAGCTTTGCGTTGTAAGCTCTCCGAATCCCAAGCCAGCGGCAAACCGCCATGAAGAAATAAGAACTTTGGCCCGCATCATCTCCGACCAACCTCTCCCCAACCCCGAACCTGCCGCCTGGGCCGTCCTCACAGCTATATCCAAGAACGCTCGCCTCCGTCCTCAGGGAGTGAATATGCTTTTAACTGAGGATGAGAATTGCATTGGCCGTTGTGTAGAAGATCGCTTCCTGATCAAATCCACCTCCATTAGCGCAAATCATTGCAAAATTTTTAGGGAAAGAGAAACTCATACAGATGGCAAGGTGGGTTCCAACATTCCTATTGCCCCCTTCAAAGCCTTCTTGAGAGACACAAGCACCAATGGAACTTTTCTTAATTGGATAAAGCTCAAAAAGAATTCTAAAGCCAAATTGACACATGGAGATATCGTTTCTCTTGTCTCCCCACCGCACGATGACAATTCTTATTCATTTGTATATCGAGAAATGCCCGGTTCAAATGCTGAAAATTCAAAAAGAAAATCAGAGGACATTGGCAATGAGAGCAAAAGGCTGAAAGGTATTGGCATTGGTGCACCTGATGGACCAATTTCCTTAGATGATGTTCGAAGTTTGCAACGATCAAACACGGAACTTAGGCAACAATTGGAATCTCATGTTCACACCATTGAGGCTTTGCAGTGTGAAAACAGGGTGATAAGTACCCGTCATGAAAATGAGTTGAAAGAGCTCAAGGAAGCCATGTCTAATTCATATTATGATCAGATTAAAGATTTGCAGAATCTACTAGATGCAAAGAAGAAAGAACATGATGACCTCACCGTTTCATCTGCCGAACTGCAGAATTCTATAAAGGATCTTAATGAAAGACTTAATGCATCCCTGCAATCACGTGCTGATGCAGATGAGATAATTAGTAGTCAGATAGTAACGATTTCAGAACTTGAGGCACAATTAGATGAACAAAGAAATCAGAGAAAGGGAGAACGGGAAAAAGCAGAAATGGATCTAAAGTCTGCCATACAAAAAGCACATTTAGAAGCTCAGGCAGAGATTAAGCGGCAGGCTGATGCTTACTTGCGGCAACATAGAGAACAGCAAGAATTGATTACTAAGCTTCAGGAGTCAGAGAAGGAGAGTCGTTTACTAGTAGAAATGCTAAGATCTAAGCTGGAAGATGCAAGGGATAGCCTGGTAGCATCCGAAAAGAAGACTAGGCAGCTGGAAGCACAATTTCAAGATGAACTTGTGGCTTCTGCCAACTATAGAAAGAAAATGGATGCTATGGATTTTGAATTAAAAAAATTAAGGAAGGAACTCGAAAATGAAAAGGTGGCACGAGAAGAAGCTTGGGCTAAAGTATCATCCCTTGAACTTGAAATTGCTGCTGCAATTCGTGATCTTTCTACTGAAAAACAAAGATTTCAGGGAGCTAGAGAAAGAATTATTTTGCGGGAAACCCAGTTGAGGGCGTTCTACTCCACGACCGAAGAGATTTCTAAGTTGTTCAGGAAGCAGCAGGAGCAGCTGAAGGCGATGCAAAAGACGCTGGAAGATGAAGAGAACTACGAATGCTCTTTATTCGCCGCCGGCGAATCGAATGCTGCCGTGCCTTCCTCCAATCCGATGAATTGCTTCTACAGTTCCACCCATCCCTCAGAAGAAGATCACCCGAAAGGATCTTCGAGCGCTTCCACTCCGAAGAATTCCCTCATCGAGACTTCCTGCAATGACGAAGACGAAGACGAAGACGAAGACGATGTGTGTGCCACTCAGAAGCGGAATGACAGCCAAGATGGTGACTATGCTGATAAGTTCCCCGAGATCGACGGCGTGGGGACAGAAGTCGTTCCTGAATTAAACCTGACCGAAACTGAGCGCATCGTCGGAACGGAGACCCAAGCCGGAGACGATCACGAGAGGATGAATGCAGCCGCTCTCCTCAAATGCAACAATCCTTCGTCAATGAAGATGGATGACGAGAAGCGAGAAGATGAGGAAGTGAGGACGGCGGATCTACTGGCTTCAGAAGCTGTAGGGAGCTGGGCTGTCGACACCGCCCCGTCGGTTAACGGGGAGAACGAGTCCCCGGAAGATCAACGCCGTCCCAATGATCAGAACAATCCCGATCGCGGCGGCGTCGCCGGGATCAGCGAAGCGCACCGCGCACTTTCCGCCATGATCGACATAGTCGAGCCCGGTTTCCGGCTTAAGTTTCGGGGATGCGCCGACCAAGAGTTGCGGGAGTCCCCTTCGGACGCGGAGACGGAGGAGGGCAGCCGGAGTGGGGAAGAAGACGACGACGACGGCACCGATGCGGATGGCGCTGATGCCATGATCGAAGATTCAGTAGGTTGATCTGAGCTGCCTTTTATAGCAGTTTTGACACCAAAGTGTGTGTATTGAGGGCTATAGATTCAATGTTCTTGTAAACAATGTCCAAAAAAGTAGCAAGGGGGGTATTAATAGAAAGAAATGCTACTAATGCTCTCTAGTGTTTGGAGTAGAAATGCTGGCTTTCATTTAAAAATAAAAAAATTGGCCAATTTCTTTATGGGAGTTGGAGAAATCGAGTCTTTGTGAATGGTGTTGTGGTTTAGTTAATTGATTTTATCAGTCATATATTTGTATTATTAAAGGGC

Network for GWHGAAEX016699

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00498.25	FHA	84	162	6.10E-10

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	18.750
SRP064423	SRR2545915	Juvenile tuber	16.650
SRP108465	SRR5643513	five period of Gastrodia elata	24.370
	SRR5643514	five period of Gastrodia elata	22.880
	SRR5643515	five period of Gastrodia elata	19.710
	SRR5643524	five period of Gastrodia elata	21.430
	SRR5643525	five period of Gastrodia elata	19.270
	SRR5643528	five period of Gastrodia elata	18.130
	SRR5643658	five period of Gastrodia elata	21.500
	SRR5643659	five period of Gastrodia elata	19.420
	SRR5643660	five period of Gastrodia elata	22.160
	SRR5643661	five period of Gastrodia elata	20.740
	SRR5643662	five period of Gastrodia elata	19.070
	SRR5643663	five period of Gastrodia elata	21.250
	SRR5643664	five period of Gastrodia elata	23.410
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	27.920
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	31.560
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	22.760
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	31.750
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	19.530
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	20.670
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	23.490
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	18.610
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	16.350
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	16.240
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	20.530
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	20.530
SRP279888	Gastro	Gastrodia elata tuber	28.73
	Juven	Juvenile tuber	42.81
	Mother_Gastro	Mother tuber of Gastrodia elata	24.83
	Mother_Juven	Mother tuber of Juvenile	29.33