Detail information of GWHGAAEX016701/evm.TU.scaffold_78.137


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297622743|ref|YP_003704177.1|4.00E-07Kelch repeat-containing protein [Truepera radiovictrix DSM 17093]
KOGKOG10723.00E-94FOG: Kelch repeat
nrgi|672126814|ref|XP_008786866.1|8.11E-114PREDICTED: F-box/kelch-repeat protein At5g26960-like [Phoenix dactylifera]
Swissprottr|Q6NPN5|FK113_ARATH7.00E-95F-box/kelch-repeat protein At5g26960
trEMBLtr|A0A078G4W4|A0A078G4W4_BRANA3.00E-96BnaA09g04010D protein {ECO:0000313|EMBL:CDY19748.1}
TAIRAT5G269603.00E-94Galactose oxidase/kelch repeat superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008625741942575539-
Transcript Sequence

Network for GWHGAAEX016701

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00646.32F-box36771.60E-05
PF01344.24Kelch_11571975.80E-09
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.910
SRR2545915Juvenile tuber13.740
SRP108465SRR5643513five period of Gastrodia elata12.650
SRR5643514five period of Gastrodia elata12.020
SRR5643515five period of Gastrodia elata20.040
SRR5643524five period of Gastrodia elata11.510
SRR5643525five period of Gastrodia elata16.600
SRR5643528five period of Gastrodia elata18.440
SRR5643658five period of Gastrodia elata11.180
SRR5643659five period of Gastrodia elata38.200
SRR5643660five period of Gastrodia elata29.020
SRR5643661five period of Gastrodia elata40.220
SRR5643662five period of Gastrodia elata64.160
SRR5643663five period of Gastrodia elata41.200
SRR5643664five period of Gastrodia elata78.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.190
SRR6049655Rhizomagastrodiae_C368-T10_good_19.460
SRR6049656Rhizomagastrodiae_C368-T07_good_112.660
SRR6049657Rhizomagastrodiae_C368-T07_good_115.130
SRR6049658Rhizomagastrodiae_C368-T04_good_110.150
SRR6049659Rhizomagastrodiae_C368-T04_good_110.230
SRR6049660Rhizomagastrodiae_C368-T01_good_112.270
SRR6049661Rhizomagastrodiae_C368-T04_good_111.430
SRR6049662Rhizomagastrodiae_C368-T01_good_112.670
SRR6049663Rhizomagastrodiae_C368-T01_good_113.900
SRR6049664Rhizomagastrodiae_C368-T10_good_110.630
SRR6049665Rhizomagastrodiae_C368-T10_good_110.630
SRP279888GastroGastrodia elata tuber 21.44
JuvenJuvenile tuber16.12
Mother_GastroMother tuber of Gastrodia elata 17.13
Mother_JuvenMother tuber of Juvenile 22.71