Detail information of GWHGAAEX016703/evm.TU.scaffold_78.139


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG42542.00E-21Phytoene desaturase
nrgi|573921623|ref|XP_006648402.1|1.26E-46PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2-like [Oryza brachyantha]
Swissprottr|F4K657|BL1S2_ARATH1.00E-32Biogenesis of lysosome-related organelles complex 1 subunit 2
trEMBLtr|J3LAE7|J3LAE7_ORYBR5.00E-47Uncharacterized protein {ECO:0000313|EnsemblPlants:OB02G16140.1}
TAIRAT5G495502.00E-21Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008625872212602675-
Transcript Sequence

Network for GWHGAAEX016703

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10046.8BLOC1_2191126.00E-24
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms71.240
SRR2545915Juvenile tuber36.920
SRP108465SRR5643513five period of Gastrodia elata99.950
SRR5643514five period of Gastrodia elata96.140
SRR5643515five period of Gastrodia elata94.690
SRR5643524five period of Gastrodia elata103.260
SRR5643525five period of Gastrodia elata159.830
SRR5643528five period of Gastrodia elata158.070
SRR5643658five period of Gastrodia elata161.420
SRR5643659five period of Gastrodia elata67.340
SRR5643660five period of Gastrodia elata67.220
SRR5643661five period of Gastrodia elata83.460
SRR5643662five period of Gastrodia elata59.690
SRR5643663five period of Gastrodia elata57.620
SRR5643664five period of Gastrodia elata69.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_195.830
SRR6049655Rhizomagastrodiae_C368-T10_good_146.900
SRR6049656Rhizomagastrodiae_C368-T07_good_187.730
SRR6049657Rhizomagastrodiae_C368-T07_good_1105.500
SRR6049658Rhizomagastrodiae_C368-T04_good_174.020
SRR6049659Rhizomagastrodiae_C368-T04_good_176.160
SRR6049660Rhizomagastrodiae_C368-T01_good_179.680
SRR6049661Rhizomagastrodiae_C368-T04_good_155.620
SRR6049662Rhizomagastrodiae_C368-T01_good_192.930
SRR6049663Rhizomagastrodiae_C368-T01_good_176.110
SRR6049664Rhizomagastrodiae_C368-T10_good_1119.160
SRR6049665Rhizomagastrodiae_C368-T10_good_1119.160
SRP279888GastroGastrodia elata tuber 53.84
JuvenJuvenile tuber103.30
Mother_GastroMother tuber of Gastrodia elata 72.36
Mother_JuvenMother tuber of Juvenile 113.65