Detail information of GWHGAAEX016705/evm.TU.scaffold_78.141


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|347754260|ref|YP_004861824.1|4.00E-57short-chain alcohol dehydrogenase-like protein [Candidatus Chloracidobacterium thermophilum B]
KOGKOG07257.00E-106Reductases with broad range of substrate specificities
nrgi|743786501|ref|XP_010922188.1|1.02E-138PREDICTED: zerumbone synthase-like [Elaeis guineensis]
Swissprottr|F1SWA0|ZERSY_ZINZE1.00E-132Zerumbone synthase
trEMBLtr|A0A096T9R8|A0A096T9R8_MAIZE1.00E-129Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G332976_P01}
TAIRAT1G523407.00E-106NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008626135072620392-
Transcript Sequence

Network for GWHGAAEX016705

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13561.5adh_short_C2242691.10E-60
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09841ABA2 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Carotenoid biosynthesismap00906

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.250
SRR2545915Juvenile tuber17.990
SRP108465SRR5643513five period of Gastrodia elata40.820
SRR5643514five period of Gastrodia elata32.440
SRR5643515five period of Gastrodia elata42.770
SRR5643524five period of Gastrodia elata32.850
SRR5643525five period of Gastrodia elata61.350
SRR5643528five period of Gastrodia elata57.170
SRR5643658five period of Gastrodia elata47.230
SRR5643659five period of Gastrodia elata71.140
SRR5643660five period of Gastrodia elata81.570
SRR5643661five period of Gastrodia elata78.210
SRR5643662five period of Gastrodia elata85.030
SRR5643663five period of Gastrodia elata80.820
SRR5643664five period of Gastrodia elata86.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_140.600
SRR6049655Rhizomagastrodiae_C368-T10_good_123.720
SRR6049656Rhizomagastrodiae_C368-T07_good_140.000
SRR6049657Rhizomagastrodiae_C368-T07_good_136.160
SRR6049658Rhizomagastrodiae_C368-T04_good_133.780
SRR6049659Rhizomagastrodiae_C368-T04_good_129.850
SRR6049660Rhizomagastrodiae_C368-T01_good_137.170
SRR6049661Rhizomagastrodiae_C368-T04_good_133.410
SRR6049662Rhizomagastrodiae_C368-T01_good_134.610
SRR6049663Rhizomagastrodiae_C368-T01_good_135.730
SRR6049664Rhizomagastrodiae_C368-T10_good_138.740
SRR6049665Rhizomagastrodiae_C368-T10_good_138.740
SRP279888GastroGastrodia elata tuber 92.23
JuvenJuvenile tuber64.48
Mother_GastroMother tuber of Gastrodia elata 44.63
Mother_JuvenMother tuber of Juvenile 39.16