Detail information of GWHGAAEX016711/evm.TU.scaffold_78.149


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|410694120|ref|YP_003624742.1|5.00E-13putative Soluble quinoprotein glucose dehydrogenase [Thiomonas arsenitoxydans]
nrgi|672117592|ref|XP_008781987.1|0PREDICTED: uncharacterized protein LOC103701627 [Phoenix dactylifera]
trEMBLtr|A2X987|A2X987_ORYSI0Putative uncharacterized protein {ECO:0000313|EMBL:EAY87397.1}
TAIRAT1G702809.00E-152NHL domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008627410232768164-
Transcript Sequence

Network for GWHGAAEX016711

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01436.20NHL1431688.70E-05
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.350
SRR2545915Juvenile tuber14.110
SRP108465SRR5643513five period of Gastrodia elata13.000
SRR5643514five period of Gastrodia elata13.870
SRR5643515five period of Gastrodia elata11.210
SRR5643524five period of Gastrodia elata11.180
SRR5643525five period of Gastrodia elata6.550
SRR5643528five period of Gastrodia elata3.810
SRR5643658five period of Gastrodia elata4.330
SRR5643659five period of Gastrodia elata6.380
SRR5643660five period of Gastrodia elata3.840
SRR5643661five period of Gastrodia elata6.760
SRR5643662five period of Gastrodia elata4.570
SRR5643663five period of Gastrodia elata3.810
SRR5643664five period of Gastrodia elata4.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.820
SRR6049655Rhizomagastrodiae_C368-T10_good_120.970
SRR6049656Rhizomagastrodiae_C368-T07_good_116.610
SRR6049657Rhizomagastrodiae_C368-T07_good_114.400
SRR6049658Rhizomagastrodiae_C368-T04_good_18.170
SRR6049659Rhizomagastrodiae_C368-T04_good_15.950
SRR6049660Rhizomagastrodiae_C368-T01_good_120.220
SRR6049661Rhizomagastrodiae_C368-T04_good_112.440
SRR6049662Rhizomagastrodiae_C368-T01_good_119.860
SRR6049663Rhizomagastrodiae_C368-T01_good_117.400
SRR6049664Rhizomagastrodiae_C368-T10_good_114.140
SRR6049665Rhizomagastrodiae_C368-T10_good_114.140
SRP279888GastroGastrodia elata tuber 4.37
JuvenJuvenile tuber26.84
Mother_GastroMother tuber of Gastrodia elata 2.21
Mother_JuvenMother tuber of Juvenile 5.46