Detail information of GWHGAAEX016716/evm.TU.scaffold_78.154


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|15806543|ref|NP_295256.1|9.00E-19hypothetical protein DR_1533 [Deinococcus radiodurans R1]
KOGKOG10824.00E-88Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing
nrgi|672137397|ref|XP_008792425.1|0PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1-like [Phoenix dactylifera]
Swissprottr|Q9FF80|SUVH1_ARATH0Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1
trEMBLtr|Q6F322|Q6F322_ORYSJ0cDNA clone:J023004N15, full insert sequence {ECO:0000313|EMBL:BAG91226.1}
TAIRAT5G04940_24.00E-88Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008627969172800557+
Transcript Sequence

Network for GWHGAAEX016716

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02182.16SAD_SRA1453017.00E-45
PF05033.15Pre-SET3304281.20E-14
PF00856.27SET4475781.30E-18
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilySET

KEGG pathway

KO Enzyme pathway mapID
K11420EHMT Metabolic pathways map01100
Lysine degradationmap00310
Longevity regulating pathwaymap04211

Gene Ontology

GO term OntologyName
GO:0016571Biological Processhistone methylation
GO:0034968Biological Processhistone lysine methylation
GO:0005515Molecular Functionprotein binding
GO:0018024Molecular Functionhistone-lysine N-methyltransferase activity
GO:0008270Molecular Functionzinc ion binding
GO:0005634Cellular Componentnucleus

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.580
SRR2545915Juvenile tuber14.580
SRP108465SRR5643513five period of Gastrodia elata12.480
SRR5643514five period of Gastrodia elata12.050
SRR5643515five period of Gastrodia elata12.120
SRR5643524five period of Gastrodia elata12.280
SRR5643525five period of Gastrodia elata14.120
SRR5643528five period of Gastrodia elata10.060
SRR5643658five period of Gastrodia elata12.980
SRR5643659five period of Gastrodia elata19.200
SRR5643660five period of Gastrodia elata18.090
SRR5643661five period of Gastrodia elata18.540
SRR5643662five period of Gastrodia elata17.230
SRR5643663five period of Gastrodia elata16.480
SRR5643664five period of Gastrodia elata18.540
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.200
SRR6049655Rhizomagastrodiae_C368-T10_good_111.250
SRR6049656Rhizomagastrodiae_C368-T07_good_114.720
SRR6049657Rhizomagastrodiae_C368-T07_good_116.500
SRR6049658Rhizomagastrodiae_C368-T04_good_116.050
SRR6049659Rhizomagastrodiae_C368-T04_good_117.890
SRR6049660Rhizomagastrodiae_C368-T01_good_116.120
SRR6049661Rhizomagastrodiae_C368-T04_good_115.400
SRR6049662Rhizomagastrodiae_C368-T01_good_112.460
SRR6049663Rhizomagastrodiae_C368-T01_good_114.420
SRR6049664Rhizomagastrodiae_C368-T10_good_114.570
SRR6049665Rhizomagastrodiae_C368-T10_good_114.570
SRP279888GastroGastrodia elata tuber 14.77
JuvenJuvenile tuber18.18
Mother_GastroMother tuber of Gastrodia elata 8.96
Mother_JuvenMother tuber of Juvenile 10.50