Detail information of GWHGAAEX016719/evm.TU.scaffold_78.157
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|116749241|ref|YP_845928.1| | 6.00E-100 | K+ potassium transporter [Syntrophobacter fumaroxidans MPOB] |
| nr | gi|695060290|ref|XP_009418529.1| | 0 | PREDICTED: potassium transporter 6-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q9M7J9|POT8_ARATH | 0 | Potassium transporter 8 |
| trEMBL | tr|A0A068F6H9|A0A068F6H9_ELAGV | 0 | Potassium transporter {ECO:0000256|RuleBase:RU321113} |
| TAIR | AT5G14880 | 0 | Potassium transporter family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000086 | 2886706 | 2903932 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016719
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module7 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02705.15 | K_trans | 25 | 608 | 5.30E-185 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0071805 | Biological Process | potassium ion transmembrane transport |
| GO:0015079 | Molecular Function | potassium ion transmembrane transporter activity |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.180 |
| SRR2545915 | Juvenile tuber | 3.160 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 2.280 |
| SRR5643514 | five period of Gastrodia elata | 1.900 | |
| SRR5643515 | five period of Gastrodia elata | 4.080 | |
| SRR5643524 | five period of Gastrodia elata | 2.760 | |
| SRR5643525 | five period of Gastrodia elata | 6.940 | |
| SRR5643528 | five period of Gastrodia elata | 4.520 | |
| SRR5643658 | five period of Gastrodia elata | 5.450 | |
| SRR5643659 | five period of Gastrodia elata | 2.330 | |
| SRR5643660 | five period of Gastrodia elata | 1.730 | |
| SRR5643661 | five period of Gastrodia elata | 1.570 | |
| SRR5643662 | five period of Gastrodia elata | 4.120 | |
| SRR5643663 | five period of Gastrodia elata | 1.270 | |
| SRR5643664 | five period of Gastrodia elata | 1.400 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 1.400 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.490 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 1.250 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 1.720 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 2.120 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.520 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 1.950 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 2.100 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 2.660 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 1.670 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 1.170 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 1.170 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 4.00 |
| Juven | Juvenile tuber | 5.09 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 7.75 | |
| Mother_Juven | Mother tuber of Juvenile | 6.33 |