Detail information of GWHGAAEX016726/evm.TU.scaffold_78.164


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG15901.00E-61Uncharacterized conserved protein
nrgi|661879720|emb|CDP16551.1|1.13E-63unnamed protein product [Coffea canephora]
Swissprottr|Q949R9|MPC1_ARATH3.00E-62Mitochondrial pyruvate carrier 1 {ECO:0000305}
trEMBLtr|A0A068V7A1|A0A068V7A1_COFCA4.00E-64Coffea canephora
TAIRAT5G200901.00E-61Uncharacterised protein family (UPF0041)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008630755863100240+
Transcript Sequence

Network for GWHGAAEX016726

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03650.12MPC41042.80E-36
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006850Biological Processmitochondrial pyruvate transport
GO:0005743Cellular Componentmitochondrial inner membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms63.920
SRR2545915Juvenile tuber113.730
SRP108465SRR5643513five period of Gastrodia elata179.350
SRR5643514five period of Gastrodia elata211.680
SRR5643515five period of Gastrodia elata180.220
SRR5643524five period of Gastrodia elata189.660
SRR5643525five period of Gastrodia elata119.190
SRR5643528five period of Gastrodia elata126.870
SRR5643658five period of Gastrodia elata131.310
SRR5643659five period of Gastrodia elata90.180
SRR5643660five period of Gastrodia elata91.140
SRR5643661five period of Gastrodia elata92.690
SRR5643662five period of Gastrodia elata88.570
SRR5643663five period of Gastrodia elata89.030
SRR5643664five period of Gastrodia elata84.120
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_199.140
SRR6049655Rhizomagastrodiae_C368-T10_good_1302.290
SRR6049656Rhizomagastrodiae_C368-T07_good_1112.440
SRR6049657Rhizomagastrodiae_C368-T07_good_198.600
SRR6049658Rhizomagastrodiae_C368-T04_good_179.490
SRR6049659Rhizomagastrodiae_C368-T04_good_173.480
SRR6049660Rhizomagastrodiae_C368-T01_good_187.950
SRR6049661Rhizomagastrodiae_C368-T04_good_178.710
SRR6049662Rhizomagastrodiae_C368-T01_good_1117.550
SRR6049663Rhizomagastrodiae_C368-T01_good_196.390
SRR6049664Rhizomagastrodiae_C368-T10_good_1167.640
SRR6049665Rhizomagastrodiae_C368-T10_good_1167.640
SRP279888GastroGastrodia elata tuber 100.89
JuvenJuvenile tuber99.89
Mother_GastroMother tuber of Gastrodia elata 166.91
Mother_JuvenMother tuber of Juvenile 112.49