Detail information of GWHGAAEX016730/evm.TU.scaffold_78.169


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|427738965|ref|YP_007058509.1|4.00E-07poly(A) polymerase [Rivularia sp. PCC 7116]
KOGKOG27569.00E-119Predicted Mg2+-dependent phosphodiesterase TTRAP
nrgi|743758940|ref|XP_010929539.1|6.79E-160PREDICTED: uncharacterized protein LOC105050993 isoform X1 [Elaeis guineensis]
trEMBLtr|M0SUA5|M0SUA5_MUSAM4.00E-154Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P33430_001}
TAIRAT1G11800_29.00E-119Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008632382563241534+
Transcript Sequence

Network for GWHGAAEX016730

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03372.22Exo_endo_phos883142.00E-12
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.600
SRR2545915Juvenile tuber8.000
SRP108465SRR5643513five period of Gastrodia elata13.930
SRR5643514five period of Gastrodia elata13.570
SRR5643515five period of Gastrodia elata8.740
SRR5643524five period of Gastrodia elata11.200
SRR5643525five period of Gastrodia elata10.350
SRR5643528five period of Gastrodia elata4.970
SRR5643658five period of Gastrodia elata6.680
SRR5643659five period of Gastrodia elata20.450
SRR5643660five period of Gastrodia elata23.350
SRR5643661five period of Gastrodia elata21.430
SRR5643662five period of Gastrodia elata20.880
SRR5643663five period of Gastrodia elata17.800
SRR5643664five period of Gastrodia elata21.510
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.590
SRR6049655Rhizomagastrodiae_C368-T10_good_115.790
SRR6049656Rhizomagastrodiae_C368-T07_good_116.850
SRR6049657Rhizomagastrodiae_C368-T07_good_115.890
SRR6049658Rhizomagastrodiae_C368-T04_good_112.610
SRR6049659Rhizomagastrodiae_C368-T04_good_19.790
SRR6049660Rhizomagastrodiae_C368-T01_good_113.570
SRR6049661Rhizomagastrodiae_C368-T04_good_115.120
SRR6049662Rhizomagastrodiae_C368-T01_good_119.770
SRR6049663Rhizomagastrodiae_C368-T01_good_112.080
SRR6049664Rhizomagastrodiae_C368-T10_good_118.060
SRR6049665Rhizomagastrodiae_C368-T10_good_118.060
SRP279888GastroGastrodia elata tuber 29.41
JuvenJuvenile tuber42.78
Mother_GastroMother tuber of Gastrodia elata 16.02
Mother_JuvenMother tuber of Juvenile 21.72