Detail information of GWHGAAEX016733/evm.TU.scaffold_78.172


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262196729|ref|YP_003267938.1|6.00E-16serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
KOGKOG23450Serine/threonine protein kinase/TGF-beta stimulated factor
nrgi|731911531|gb|AIZ68208.1|0Serine/threonine-protein kinase 16 [Ornithogalum saundersiae]
Swissprottr|Q9ZSA3|CDPKM_ARATH1.00E-14Calcium-dependent protein kinase 22
trEMBLtr|A0A059D028|A0A059D028_EUCGR0Uncharacterized protein {ECO:0000313|EMBL:KCW83786.1}
TAIRAT5G081600serine/threonine protein kinase 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008633274323357250+
Transcript Sequence

Network for GWHGAAEX016733

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase683352.80E-29
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyNAK

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.340
SRR2545915Juvenile tuber20.940
SRP108465SRR5643513five period of Gastrodia elata16.790
SRR5643514five period of Gastrodia elata17.970
SRR5643515five period of Gastrodia elata14.480
SRR5643524five period of Gastrodia elata18.260
SRR5643525five period of Gastrodia elata25.340
SRR5643528five period of Gastrodia elata25.600
SRR5643658five period of Gastrodia elata30.140
SRR5643659five period of Gastrodia elata12.750
SRR5643660five period of Gastrodia elata15.180
SRR5643661five period of Gastrodia elata12.590
SRR5643662five period of Gastrodia elata16.950
SRR5643663five period of Gastrodia elata13.770
SRR5643664five period of Gastrodia elata17.310
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.800
SRR6049655Rhizomagastrodiae_C368-T10_good_121.230
SRR6049656Rhizomagastrodiae_C368-T07_good_120.020
SRR6049657Rhizomagastrodiae_C368-T07_good_125.050
SRR6049658Rhizomagastrodiae_C368-T04_good_130.010
SRR6049659Rhizomagastrodiae_C368-T04_good_132.500
SRR6049660Rhizomagastrodiae_C368-T01_good_123.440
SRR6049661Rhizomagastrodiae_C368-T04_good_123.810
SRR6049662Rhizomagastrodiae_C368-T01_good_116.320
SRR6049663Rhizomagastrodiae_C368-T01_good_119.660
SRR6049664Rhizomagastrodiae_C368-T10_good_119.600
SRR6049665Rhizomagastrodiae_C368-T10_good_119.600
SRP279888GastroGastrodia elata tuber 28.51
JuvenJuvenile tuber27.33
Mother_GastroMother tuber of Gastrodia elata 33.91
Mother_JuvenMother tuber of Juvenile 28.53