Gene detail

Detail information of GWHGAAEX016735/CADD01320.1.gene

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000086	3390625	3393134	+

Transcript Sequence
>GWHTAAEX016735 CGCCGAAATCCTTCGAAAACCCTAAGGCGGCTGCTTTTTGTGCGTATCTCACACGATCCTGATGAAATCGACTAATGCTCTTGTAGATTCAATGGCAAAGAAATCCTAATTCGTGGATTGAATATTCATCTCTTTCGCCATCTTTATACTTGCTTTATAATCTTATTTTTTCGATTTCATTTGTTTTGTTTTTTGCATTGCTTTGAGTCGTTTTTGATTGCAGCAAAGCGAAGGGATGATCTGATTTGATCTGAATATGATGCTGATTTTACTTCGTATTGTCCTTCAAAGCTCTCTGATTGCTTTGCATATACTGTTTTTGTTTTTTTTTATTTATATTGTTGAATGAATCGAGGACCTAGTTTCGTTCATCGAATCTGCTTGAACGAACAGTCTCGAACTCAATCAGAAGTAAGCAAATCGACGAGTGATTGAAGATTCGAGTTCTTTTATGAGTCCACGATTAAAGCTCTTAAAGTTGTTTTGGTTCTGAAGCGATTATTTCATTTTGATTTATTCATGCTTTAATTATTTTTTGTGATGCAACAAAGTGCGTCAAATATCCTTCCCTTCAGCTTCTTAGGCATGTCTTATAAACCCTAATACACTTCTAAATGTTTCATTCTCTTCTTTCTTTTCTTTCTTACTCATGATCTTATCTTCATTTTCAGCTCTCTTCTTATTTTATCTGTATTACATCAAGCTATAATCATCTTATCTTTTTTTATTTATTATAGCTCTCTCATAAAGCTTCTAGATCTTCGAATTAAGGTAAAATCTATATATTTTTTATAATAATATCATTACAGTTATAGCCATTACAATGCCTTGTATAAATTACAACTCAAATTATACAAAAATTTGAATATATTCTCACAATTAAAGCTAACACTTTTTATATAAGGCACCGTAAATTAAAAATTGGGATTTTTATTTGCTTATCATAAAAAAATTTTAAATTTTTTTATAAAACCGCTAAATTTTAAATTTTATTTATACAACACCTTAATCTTCAAAACACACTGTTCTAACAATTTTCTAACGTCGCCAAATGCTTCCGGCCGGCTCAATGGCAGCAGTTGCAGAGCTTCGTGAAAGGAGAACAGGTGAAGTTGCTGCCGAAATGGGTCGTGGTTCAGTAGTGTTGACAAGAAGAAGAGGTACCATCATCAACTTCCTTCCAGGCATAGCTAGCTTGAGAAAGAGAAACAATAGAAACTAGATCAAAATAGTGAAATGCAATCTACATTGACCCTTTGATGAGAATTCCATTCGATGAATAAATTTACCAATCATTTAATCAATGTTTTTAAACATCAATGGGAGTTGGGGCTGAAAGCGTGTAAAGCAGCTGGTCTTGCCATTTCTAACAAGAGCCCTAATCTTCCTCATCTTCTTCCTTCTTTCTTCTCCACAGAATGACAACCAGAATCTCAATGCATCCTCAATATCACCTGGCTCTTAACCTTCTCCATATCTCCAATAGACATTTTCGAATCCGAAGACCATTTTTTTTCCCCAGCTTCTGAAATTCTAGCGCCGGCATTTATTCCCATCCATTCAGATAATTTATCTAATTTTTCAAGCAAGCATCCTCTCAATCTGGGGTCTCTCTCAGCTTTCTTCAACTAGTTTGACATGCAAGACATCAAAGGCGTCCTAATACCTTTCAGAGTTTACTTGCCTCATCTCTAGTTGATGATGATTGTGATCAGCCTCTTCTGCAATATGTGCCAATGCGGGAGACTTGATGGCTGTGTTCTCTAGATTTAGGTGTTGTACAATAAAATTTTAAAATTTAGATGTTTTATGAGTAATATTTAAAAAAAATTATGGGTTGTTTTGGTTAATGTTATGTGAAAGTTATTAAAAGAGCATGTTATTTAAATTGCAGTGTAATTCAGATAATCCATATGTTTCAATGTTTTTTAAACTGTCATTCATGGTATGTTACAAATTAGGTAAGATTACCCTAACACTAATCAATGCTAAATTTGTAGAATTTGGGGTATAAAATTGGCTACCGTATGTTCGTCTTCATCCTTTGCCATCGCCTATTCTCTAATGCGGAGCTTGCTCGGGTTTGTCGGGAACTTAGGATTTATAGAGATTCTAAGAATTTGTAATGCTAGGAAATTGAGCCATTTCATCATATGAAAATATGATATTTTGTGCATTACTTAAAATGATGTTTAGGGTTTAGTGTTGTATTCAGTTGTTAATAATTGTAATCATTATTTAGTATTTGTTCCAAGTTTGGAATTGAGGATTGAGAAGTCCACTTGATTGTCTATGTTGTTGGTTTTTTGTTTATCTTTTAAGAATGTATTCTGGTTTAATGTTTGTTGGAGTTGGTGTTAGTTGAGTTTTTTTAATTACTTTCCTCTTTCGTCCCTCAAGGATGAGGGGGGGGGGGATTATTTAAGGATATATTAGAAATATATTATATTACACTCAGATTATCTTAGGACATACAACTCGTAAATGCTTGTGTTATTTCACTTTTGTTG

Network for GWHGAAEX016735

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	39.230
SRP064423	SRR2545915	Juvenile tuber	4.850
SRP108465	SRR5643513	five period of Gastrodia elata	9.490
	SRR5643514	five period of Gastrodia elata	6.140
	SRR5643515	five period of Gastrodia elata	4.340
	SRR5643524	five period of Gastrodia elata	5.140
	SRR5643525	five period of Gastrodia elata	2.360
	SRR5643528	five period of Gastrodia elata	4.500
	SRR5643658	five period of Gastrodia elata	2.970
	SRR5643659	five period of Gastrodia elata	2.680
	SRR5643660	five period of Gastrodia elata	3.790
	SRR5643661	five period of Gastrodia elata	3.110
	SRR5643662	five period of Gastrodia elata	2.880
	SRR5643663	five period of Gastrodia elata	3.590
	SRR5643664	five period of Gastrodia elata	1.240
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	18.850
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	37.490
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	23.030
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	23.000
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	15.140
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	10.270
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	19.480
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	26.380
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	24.220
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.980
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	21.380
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	21.380
SRP279888	Gastro	Gastrodia elata tuber	9.60
	Juven	Juvenile tuber	15.36
	Mother_Gastro	Mother tuber of Gastrodia elata	1.75
	Mother_Juven	Mother tuber of Juvenile	2.01