Detail information of GWHGAAEX016737/evm.TU.scaffold_78.176


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|189502744|ref|YP_001958461.1|2.00E-25hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
KOGKOG11873.00E-140Serine/threonine protein kinase
nrgi|672130776|ref|XP_008788929.1|0PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730 [Phoenix dactylifera]
Swissprottr|Q9LFV3|Y5157_ARATH9.00E-141Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730
trEMBLtr|M0T0R8|M0T0R8_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P22430_001}
TAIRAT5G157303.00E-140Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008634191263429437-
Transcript Sequence

Network for GWHGAAEX016737

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr1143771.20E-49
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_LRR-I-2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms32.810
SRR2545915Juvenile tuber24.270
SRP108465SRR5643513five period of Gastrodia elata28.170
SRR5643514five period of Gastrodia elata24.470
SRR5643515five period of Gastrodia elata28.780
SRR5643524five period of Gastrodia elata26.910
SRR5643525five period of Gastrodia elata29.070
SRR5643528five period of Gastrodia elata37.020
SRR5643658five period of Gastrodia elata23.030
SRR5643659five period of Gastrodia elata20.790
SRR5643660five period of Gastrodia elata22.970
SRR5643661five period of Gastrodia elata21.650
SRR5643662five period of Gastrodia elata23.160
SRR5643663five period of Gastrodia elata19.330
SRR5643664five period of Gastrodia elata19.640
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.780
SRR6049655Rhizomagastrodiae_C368-T10_good_119.950
SRR6049656Rhizomagastrodiae_C368-T07_good_122.690
SRR6049657Rhizomagastrodiae_C368-T07_good_126.460
SRR6049658Rhizomagastrodiae_C368-T04_good_137.430
SRR6049659Rhizomagastrodiae_C368-T04_good_138.920
SRR6049660Rhizomagastrodiae_C368-T01_good_124.800
SRR6049661Rhizomagastrodiae_C368-T04_good_132.780
SRR6049662Rhizomagastrodiae_C368-T01_good_122.910
SRR6049663Rhizomagastrodiae_C368-T01_good_126.310
SRR6049664Rhizomagastrodiae_C368-T10_good_131.260
SRR6049665Rhizomagastrodiae_C368-T10_good_131.260
SRP279888GastroGastrodia elata tuber 35.62
JuvenJuvenile tuber20.74
Mother_GastroMother tuber of Gastrodia elata 77.96
Mother_JuvenMother tuber of Juvenile 61.89