Gene detail

Detail information of GWHGAAEX016739/evm.TU.scaffold_78.178

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672179035\|ref\|XP_008809674.1\|	0	PREDICTED: uncharacterized protein At1g04910-like [Phoenix dactylifera]
Swissprot	tr\|Q8W486\|Y1491_ARATH	3.00E-80	Uncharacterized protein At1g04910
trEMBL	tr\|M0SDI3\|M0SDI3_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P10660_001}
TAIR	AT5G15740	0	O-fucosyltransferase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000086	3436095	3441867	-

Transcript Sequence
>GWHTAAEX016739 TCATTTTCTGTGTCTTTTCGTCCCCGTTCGGATTCGGAGGATGTTGAATTGAAGAAACAGAGCGGTTCTACGATCCGCCGCCTGCAGCTCATTCAATTGGCCTACAGAATAAATTCGCGGGGAATGCTCTAGTTTAGTTGGGCAAAGATCGGGTTGTTTTGAGTTTAATCTCTTGGGGAACTGCTACCGATTCTCAATCCTTTGCTCCGTTTGTTCCATTTTTAGCATTTTTGATTTGTGTGGCGTATAAAGGGCTTGCTTCTTCGTTGCGCTCGTCTGCATTGCTTTTGGTTCAGTTGTTTGGATATCTATCGGTGGATTTGTCGGAATTTGGGGGATAGGGTTTCAAATGTATGGGAATGGGGATTTTGAGCCGGGATCTGAGTGCGAGGAGAGGCACGCGTGCTTAAAATCTCACAAGGCTGCGGCGGCGGCGCAGAGATTTAAGGGCGTGATGGCTTCCAAGTCGAGGATGAAGCTGTGGATGATCCGAGCGACTACCACCGTGCTGCTGTGGACCTGCGCCGTTCAGCTTACGGCACTGGGAGAGCTGTGGGGTCCAAGGGTTCTTAAGGGCTGGCCTTCCTGCTTCAATCAGTTGGATTCTTCACCGACACTGAATCCTCCTTTGGTTTCTGATGACAAGAGTGCTCTTCCACAAAAGAGAGTCTACAAAAATAACGGTTATTTGATGGTTTCCTGCAATGGCGGCCTAAATCAAATGCGAGCTGCAATATGCGATATGGTTGCTGTTGCAAAATTTCTAAATGTGACGTTGATTATCCCGGAATTGGATAAGACTTCATTTTGGAATGATCCCAGTGAATTTCAAGATATATTTGATGTAGACCATTTCATTAATTCATTGAGGGATGAAGTTAGGATATTAAAGGAGCTTCCCCCAAGATTAAAGCAAAGAGTTGGCTTGGGAATGTACTATTCTATGCCTCCTATTAGTTGGTCTGACATTTCTTACTACAAAAATCAGATTCTGCCATTGTTCCGGAAGCACAAGATTGTGAATTTGAATAAAACTGATTCAAGGCTTGCTAACAACGGCCTGCCGCTGGAGATCCAGAAGTTGCGCTGCAAAACAAATTACGTTGCCCTCAGATTCACTCCGCAAATTGAAGAATTAGGGCAAAGGGTGATAAACATGCTCCGACGAAATGGCCCCTTTCTTGTCCTTCATCTTCGTTATGAAATGGACATGTTGGCTTTCTCGGGGTGTACTCATGGCTGCATTATGGAGGAGGCCGATGAGTTAACAAGAATGAGATATGCGTACCCTTGGTGGAAGGAAAAAATTATAGACTCTGAGCTGAAAAGAAGGGATGGTCTCTGCCCTTTGACCCCAGAGGAAACAGCCCTCATACTGAAGGCACTGGGTATTGATCAGAGTACCACAATATACATTGCAGCCGGGGAAATATATGGCGGAGCTAGGAGAATGGCCGGCCTAACTGCAGATTACCCAAATGTGGTGAGGAAAGAGACACTATTGGAGCCTTCTGATCTTAGATTTTTTCAGAATCATTCTTCCCAGATGGCAGCATTGGATTATCTGGTGTCTTTGGAGAGTGATATTTTTGTTCCTACTTATGATGGCAACATGGCTAAGGTTGTTGAAGGCCATAGGAGATACCTGGGATTCAGGAAGACTATTCTTCTAGACCGTAAGCTCCTTATCGGGCTGATAGACCAGTACAACTATGACTCCATTGATTGGGATGAGTTCTCTTCATCTGTGAAGGCCGCTCATGCTAGCCGCATGGGGAAACCCATGAGGAGAATCGCAATCAGGGACCGTCCGAAAGAAGAAGATTACTTCTACTCCAACCCTCAGGAATGCCTCAAGCTTCCCCCAAAGGATCTTCACATCACTTCTAGTTGATCTGCTTTCACAAAGAAGTCTGTGACATCCAAATGATTAGTGGAAAGAGGAGTTTGTCTTCGGGTTACCTCATTCGGAGCTTCAGACCGGTTATCACTGGTCAGCTTTCTGAAGAAAACTGAGGTGTATGCATAAGGAGATGGCCATATTAATATATATGTTTTTGTTAAAATAAGATTTCATTCTTTTGGGATTTTTTTTCATGCTTGCTGGAAGAACATATTTGTTAGATGCTTCATTGTAAACACCAGCGATTTTGAACGGGTGGGTCCTGCTATATATATTGCCTGTTTCTGTAAGTTATTAATTGCACACATCAGTTGTATTGAGATTATTTATTTTTTAATTAAATTTTATATCG

Network for GWHGAAEX016739

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10250.8	O-FucT	113	433	4.60E-78

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT106
Carbohydrate-Active enzymes Family	GT106

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	6.320
SRP064423	SRR2545915	Juvenile tuber	15.760
SRP108465	SRR5643513	five period of Gastrodia elata	9.950
	SRR5643514	five period of Gastrodia elata	17.470
	SRR5643515	five period of Gastrodia elata	15.260
	SRR5643524	five period of Gastrodia elata	17.210
	SRR5643525	five period of Gastrodia elata	15.440
	SRR5643528	five period of Gastrodia elata	10.910
	SRR5643658	five period of Gastrodia elata	16.020
	SRR5643659	five period of Gastrodia elata	20.490
	SRR5643660	five period of Gastrodia elata	17.210
	SRR5643661	five period of Gastrodia elata	20.390
	SRR5643662	five period of Gastrodia elata	23.040
	SRR5643663	five period of Gastrodia elata	23.890
	SRR5643664	five period of Gastrodia elata	19.170
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	18.730
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	14.220
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	20.740
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	14.890
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	14.010
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	11.460
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	18.970
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	17.920
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	29.240
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	23.810
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	18.300
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	18.300
SRP279888	Gastro	Gastrodia elata tuber	14.22
	Juven	Juvenile tuber	4.22
	Mother_Gastro	Mother tuber of Gastrodia elata	6.06
	Mother_Juven	Mother tuber of Juvenile	1.88