Detail information of GWHGAAEX016740/evm.TU.scaffold_78.181
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|257054330|ref|YP_003132162.1| | 2.00E-68 | putative NADP-dependent oxidoreductase [Saccharomonospora viridis DSM 43017] |
| KOG | KOG1196 | 9.00E-110 | Predicted NAD-dependent oxidoreductase |
| nr | gi|695042628|ref|XP_009408977.1| | 5.99E-153 | PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q39172|P1_ARATH | 3.00E-110 | NADP-dependent alkenal double bond reductase P1 |
| trEMBL | tr|M0TGA0|M0TGA0_MUSAM | 1.00E-150 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P10120_001} |
| TAIR | AT5G16970 | 9.00E-110 | alkenal reductase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000086 | 3465914 | 3486952 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016740
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module7 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF03909.16 | BSD | 148 | 195 | 2.40E-10 |
| PF16884.4 | ADH_N_2 | 298 | 408 | 8.40E-20 |
| PF00107.25 | ADH_zinc_N | 462 | 581 | 7.50E-23 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0016491 | Molecular Function | oxidoreductase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 7.800 |
| SRR2545915 | Juvenile tuber | 9.380 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 14.930 |
| SRR5643514 | five period of Gastrodia elata | 11.080 | |
| SRR5643515 | five period of Gastrodia elata | 15.620 | |
| SRR5643524 | five period of Gastrodia elata | 9.870 | |
| SRR5643525 | five period of Gastrodia elata | 21.750 | |
| SRR5643528 | five period of Gastrodia elata | 23.610 | |
| SRR5643658 | five period of Gastrodia elata | 25.320 | |
| SRR5643659 | five period of Gastrodia elata | 13.780 | |
| SRR5643660 | five period of Gastrodia elata | 18.800 | |
| SRR5643661 | five period of Gastrodia elata | 13.750 | |
| SRR5643662 | five period of Gastrodia elata | 15.910 | |
| SRR5643663 | five period of Gastrodia elata | 12.360 | |
| SRR5643664 | five period of Gastrodia elata | 13.570 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 18.970 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 18.390 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 34.450 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 28.720 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 11.200 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 9.830 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 28.170 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 21.350 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 25.290 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 13.190 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 20.790 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 20.790 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 12.38 |
| Juven | Juvenile tuber | 169.94 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 15.36 | |
| Mother_Juven | Mother tuber of Juvenile | 33.25 |