Gene detail

Database	Orthologs	E value	Annotation
COG	gi\|186683200\|ref\|YP_001866396.1\|	2.00E-36	signal transduction protein [Nostoc punctiforme PCC 73102]
KOG	KOG0027	1.00E-100	Calmodulin and related proteins (EF-Hand superfamily)
nr	gi\|672183350\|ref\|XP_008811949.1\|	1.69E-102	PREDICTED: calmodulin-7 isoform X1 [Phoenix dactylifera]
Swissprot	tr\|P93087\|CALM_CAPAN	6.00E-102	Calmodulin
trEMBL	tr\|A0A078CJL3\|A0A078CJL3_BRANA	5.00E-102	BnaC04g38550D protein {ECO:0000313\|EMBL:CDX77060.1}
TAIR	AT3G43810	1.00E-100	calmodulin 7

Scaffold	Start	End	Strand
GWHAAEX00000086	3797224	3815727	+

Transcript Sequence
>GWHTAAEX016749 GGTAAATTAAACTTTTTCTGTCGGAGAGCATGATTCCTCAGCTGCTTTAAATGGTAGCCTGGCAAGCTTTCATGCTTCCATGCTTCTAGGGCTTGCTACTTGTTTTTGCTTCTACTATTTCTTCGATTAATTTCTCCCTTGCTCTCTCACTCTCGTCTGCGAGGGTTTCTATGGCGGATCAACTGACGGACGAACAAATATCCGAGTTCAAGGAGGCTTTCAGCCTATTCGACAAGAATGGAGATGGGTGCATCACCACGAAGGAGCTCGGAACCGTGATGAGGTCACTAGGTCAGAACCCGACGGAAGCTGAGCTGCAGGACATGATCAACGAGGTTGATGCGGACGGCAATGGGACCATCGATTTCCCAGAGTTCCTCAACCTTATGGTTCGCAAGATGAAAGACACGGACTCCGAGGAGGAGCTCAAGGAGGCCTTCCGCGTCTTTGACAAGGACCAGAATGGCTTCATCTCTGCTGCTGAGCTCCGCCACGTCATGACGAACCTCGGCGAGAAGCTCACCGACGATGAGGTCGACGAGATGATTCGTGAGGCCGACGTCGATGGCGATGGCCAGATAAACTACGACGAGTTCGTCAAAGTCATGATGGCCAAGAAACGGCTGACTGCGAATATGGCGCAATTGCCGGCTGGCTGTAATAGCCGGCGTGCCCTCGGGAAGCTGAAGAGGTGCTGTGGCAATGGGACCTTTTCCAGAAACTGCATCATCTTATGA

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13499.5	EF-hand_7	12	73	1.10E-14
PF13499.5	EF-hand_7	83	146	1.20E-17

Protein Sequence

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
K02183	CALM	Ras signaling pathway	map04014
		Rap1 signaling pathway	map04015
		MAPK signaling pathway - plant	map04016
		Apelin signaling pathway	map04371
		Calcium signaling pathway	map04020
		Phosphatidylinositol signaling system	map04070
		cAMP signaling pathway	map04024
		cGMP-PKG signaling pathway	map04022
		Oocyte meiosis	map04114
		Cellular senescence	map04218
		C-type lectin receptor signaling pathway	map04625
		Insulin signaling pathway	map04910
		Glucagon signaling pathway	map04922
		GnRH signaling pathway	map04912
		Estrogen signaling pathway	map04915
		Oxytocin signaling pathway	map04921
		Melanogenesis	map04916
		Renin secretion	map04924
		Aldosterone synthesis and secretion	map04925
		Adrenergic signaling in cardiomyocytes	map04261
		Vascular smooth muscle contraction	map04270
		Salivary secretion	map04970
		Gastric acid secretion	map04971
		Dopaminergic synapse	map04728
		Long-term potentiation	map04720
		Neurotrophin signaling pathway	map04722
		Phototransduction	map04744
		Phototransduction - fly	map04745
		Olfactory transduction	map04740
		Inflammatory mediator regulation of TRP channels	map04750
		Circadian entrainment	map04713
		Plant-pathogen interaction	map04626

GO term	Ontology	Name
GO:0005509	Molecular Function	calcium ion binding

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	41.900
SRP064423	SRR2545915	Juvenile tuber	39.990
SRP108465	SRR5643513	five period of Gastrodia elata	61.780
	SRR5643514	five period of Gastrodia elata	61.540
	SRR5643515	five period of Gastrodia elata	55.740
	SRR5643524	five period of Gastrodia elata	59.660
	SRR5643525	five period of Gastrodia elata	67.370
	SRR5643528	five period of Gastrodia elata	53.940
	SRR5643658	five period of Gastrodia elata	66.660
	SRR5643659	five period of Gastrodia elata	54.050
	SRR5643660	five period of Gastrodia elata	58.270
	SRR5643661	five period of Gastrodia elata	63.040
	SRR5643662	five period of Gastrodia elata	56.630
	SRR5643663	five period of Gastrodia elata	51.860
	SRR5643664	five period of Gastrodia elata	74.710
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	37.540
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	34.910
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	38.730
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	38.910
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	48.410
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	48.140
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	40.480
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	45.020
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	40.880
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	49.680
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	48.560
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	48.560
SRP279888	Gastro	Gastrodia elata tuber	107.17
	Juven	Juvenile tuber	75.98
	Mother_Gastro	Mother tuber of Gastrodia elata	125.50
	Mother_Juven	Mother tuber of Juvenile	99.03