Detail information of GWHGAAEX016756/evm.TU.scaffold_78.202


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|152996457|ref|YP_001341292.1|1.00E-282OG-Fe(II) oxygenase [Marinomonas sp. MWYL1]
KOGKOG01433.00E-104Iron/ascorbate family oxidoreductases
nrgi|672167835|ref|XP_008803893.1|2.83E-150PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 3-like isoform X2 [Phoenix dactylifera]
Swissprottr|Q8H1S4|ACCH3_ARATH9.00E-1051-aminocyclopropane-1-carboxylate oxidase homolog 3
trEMBLtr|I1Q1A3|I1Q1A3_ORYGL3.00E-135Uncharacterized protein {ECO:0000313|EnsemblPlants:ORGLA06G0091600.1}
TAIRAT1G066503.00E-1042-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008640103694035482-
Transcript Sequence

Network for GWHGAAEX016756

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14226.5DIOX_N791761.40E-13
PF03171.192OG-FeII_Oxy2263294.20E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms86.370
SRR2545915Juvenile tuber116.130
SRP108465SRR5643513five period of Gastrodia elata187.800
SRR5643514five period of Gastrodia elata237.380
SRR5643515five period of Gastrodia elata209.090
SRR5643524five period of Gastrodia elata216.720
SRR5643525five period of Gastrodia elata323.840
SRR5643528five period of Gastrodia elata288.650
SRR5643658five period of Gastrodia elata420.540
SRR5643659five period of Gastrodia elata164.890
SRR5643660five period of Gastrodia elata165.490
SRR5643661five period of Gastrodia elata193.510
SRR5643662five period of Gastrodia elata235.890
SRR5643663five period of Gastrodia elata331.600
SRR5643664five period of Gastrodia elata264.910
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1215.890
SRR6049655Rhizomagastrodiae_C368-T10_good_1215.450
SRR6049656Rhizomagastrodiae_C368-T07_good_1232.010
SRR6049657Rhizomagastrodiae_C368-T07_good_1218.970
SRR6049658Rhizomagastrodiae_C368-T04_good_1337.650
SRR6049659Rhizomagastrodiae_C368-T04_good_1372.990
SRR6049660Rhizomagastrodiae_C368-T01_good_1251.420
SRR6049661Rhizomagastrodiae_C368-T04_good_1298.960
SRR6049662Rhizomagastrodiae_C368-T01_good_1188.060
SRR6049663Rhizomagastrodiae_C368-T01_good_1201.220
SRR6049664Rhizomagastrodiae_C368-T10_good_1212.030
SRR6049665Rhizomagastrodiae_C368-T10_good_1212.030
SRP279888GastroGastrodia elata tuber 267.39
JuvenJuvenile tuber197.86
Mother_GastroMother tuber of Gastrodia elata 263.59
Mother_JuvenMother tuber of Juvenile 189.17