Gene detail

Detail information of GWHGAAEX016763/evm.TU.scaffold_78.209

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|114319301\|ref\|YP_740984.1\|	1.00E-08	group 1 glycosyl transferase [Alkalilimnicola ehrlichii MLHE-1]
nr	gi\|743790536\|ref\|XP_010923197.1\|	3.46E-160	PREDICTED: uncharacterized protein LOC105046335 [Elaeis guineensis]
trEMBL	tr\|A0A061GXH6\|A0A061GXH6_THECC	1.00E-149	UDP-Glycosyltransferase superfamily protein {ECO:0000313\|EMBL:EOY33902.1}
TAIR	AT5G59070	8.00E-128	UDP-Glycosyltransferase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000086	4237483	4239200	+

Transcript Sequence
>GWHTAAEX016763 TCACTATTAATATTTCTTATTCATGCCTAGCTTTGTCAGAGGAAGACAATAAACTTGTCTCCGCAGTGTATGAGAAATTATTCAAACTCCTCATATACGACTAATCTTATAATTTATGAGAGGAAGAAGATAAACTTCTCTGTTTTACAGGAGAATTGAACTCAAGATAGGATAAAAAATTTTATTTTTTCAAAATTTTTTAGCCATGCACACAGCATAGGTGATAAGCTTCCTCTCACAGAGCTAAGCATGGCAAAGGAGCACATCCCCTCAACTCCAAAACGCTTCCGCCCCCTCTACTACACTCTCCTCTTTTCCTCCCTCACCCTCATCTACTTCTTCTCTCACACAACACCAATCAAAGCTACCATCGCAACCACACCCCTCATAAACCCCTCTTCACCCACCATCAACATCCTCACATTCCCCTCCCCATTGAACCAGCTCTCGTTCTCCCCCAACCCGCCTCCCCGTTCCCTAAAGTTCGCCGTATTCGTCAAGCGCTGGCCATCACCGAGCCTCGCCGGCGCCTCGAGCGCCACGCCCTCACTCTCCACCTTGCCCTCTCGCGCCGCGGCCACCACGTCCACGTCTTCACCACAAACTCCTCCGTCCCCCACTTTCGCCCCAACCCCCCTTTCCTCACCTTCCACCCCACCCCCCCCGAGCCCAGCGGGCGCACTCGACCAACCCCTTATGTGGAGCGAATTCGTCGCCGAGAACGCTTCCCGCCCCTTCGACCTCGTCCACTCAGAGAGTGTCGGCCTCTTCCACGCCCGAGCCCGCGCACTCCCCCGCATCACCGCTGTCTCCTGGCATGGCTTTGCCTACGAGGCCATCCACTCTGACGTCGTCCAGGATCTCCTTCGAGAGCCCGGTGGGCCCCGCTCACCCTCGTTCCCCGCCCGGCTTGCCAGGGTCGTCGACGAGGTCAAATTCTTCCCAGACTACGCCCACCACGTCGCCACCAGCGATCACGCCGGCGACGTTCTCAGGCGCGTATACATGCTCCCGGAGGGCAGAGTCCACGTCATCCTCAACGGCGCCGACGAGGAGCTCTACAAGCCTGGCAGGAGGGCCCGCCGGTTCCCCGTGCCCGAAGGCGCCGAGCTCGTCATAGGAATGGCCGGGAGGCTGACCGTTTTCTTTCTGGTCGCAGGGGACGGGCCCTGGGCCAGCAGATACCGAGCCTTGGGCCGGAACCTCATCCTCGCCGGTCCGCTGAAGCAGACAGAGCTGGCCGAGTTCTACAACTCGCTGGACGTGCTCCTGAACCCGACCCTGAGGGCGCAGGGGCTGGACCACACCTTCATCGAAGCCATGCTCTGCGGGGTTCCGGTGATGGGAACCCGGTTCGCGAGCATCACCGGGTCGGTTATCGTCGGACCGGAGGTTGGGTACGCATTCCGGCCGACGGTGGAGTCGGTGAAAAAAGCGATTTTGGAGGTGTGGAAGGACGGAAGGGATGCGCTGAGGAGGAAAGGCACGGCGGCCAGAGAAAGGGCGCTCCGTCTCTTCACTGCTAAGAAAATGTCGGCGGCCTATGAGAGATTGTTCCTTTGCATCGCTGACGAACGTTACTGCAGCTTCCCTCTCCTTCCCGGAGATGATCCTCTGCCCTCGACGCCAATTCCTTTGATAAAATACTGA

Network for GWHGAAEX016763

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13439.5	Glyco_transf_4	132	269	4.70E-08
PF13692.5	Glyco_trans_1_4	298	403	5.10E-11

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT4

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.140
SRP064423	SRR2545915	Juvenile tuber	0.210
SRP108465	SRR5643513	five period of Gastrodia elata	0.440
	SRR5643514	five period of Gastrodia elata	0.730
	SRR5643515	five period of Gastrodia elata	0.270
	SRR5643524	five period of Gastrodia elata	0.370
	SRR5643525	five period of Gastrodia elata	0.090
	SRR5643528	five period of Gastrodia elata	0.050
	SRR5643658	five period of Gastrodia elata	0.000
	SRR5643659	five period of Gastrodia elata	0.000
	SRR5643660	five period of Gastrodia elata	0.000
	SRR5643661	five period of Gastrodia elata	0.040
	SRR5643662	five period of Gastrodia elata	0.000
	SRR5643663	five period of Gastrodia elata	0.030
	SRR5643664	five period of Gastrodia elata	0.080
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.130
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.480
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.280
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.290
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.200
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.130
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.200
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.060
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.380
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.380
SRP279888	Gastro	Gastrodia elata tuber	0.00
	Juven	Juvenile tuber	0.01
	Mother_Gastro	Mother tuber of Gastrodia elata	0.15
	Mother_Juven	Mother tuber of Juvenile	0.24