Gene detail

Detail information of GWHGAAEX016775/evm.TU.scaffold_79.1

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|436838258\|ref\|YP_007323474.1\|	8.00E-29	cytochrome P450 [Fibrella aestuarina BUZ 2]
KOG	KOG0156	0	Cytochrome P450 CYP2 subfamily
nr	gi\|743791912\|ref\|XP_010923556.1\|	0	PREDICTED: cytochrome P450 78A5-like [Elaeis guineensis]
Swissprot	tr\|Q9LMX7\|C78A5_ARATH	0	Cytochrome P450 78A5
trEMBL	tr\|A0A067FR99\|A0A067FR99_CITSI	0	Uncharacterized protein {ECO:0000313\|EMBL:KDO65681.1}
TAIR	AT1G13710	0	cytochrome P450, family 78, subfamily A, polypeptide 5

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000082	19671	21518	-

Transcript Sequence
>GWHTAAEX016775 ATGGGGTTGGATGTCGTGGATTCTACAGCCGCTTATTTCCAGCCGCTCTTCCTCCGGAAGGAGGCTCTCTCACCAGCGATCCTTATTGTCGCGTTAGCTCTTGGTGCTCTGTTGCTGTTCCCGGGGGGCATTGCATGGCTGTTGTACTCTCCTATAATGATCAGCGGGCGGCGGCGCTCGAAGATTCCCGGCCCTTCGGGCGTGATGACAACGGTACTCTCCAGCAGCATGGCCCACAGAGCCCTGGCGAGCCTGGCAAAATCCATGGGAGCTACCGAACTGATGGCCTTCTCGGTGGGCATCACCCGCTTCATTATGTCGAGCCATCCAGAGACTGCAAGGGAGATCCTCAACAGCTCTGCATTTGCCAACCGCCCAATCAAGGAGTCGGCTTACGAGCTACTGTTCCACCGCGCCATGGGGTTCGCTCCTTTTGGGGAGTACTGGAGAAATTTGAGAAGAATTTCGGCAACTTACCTGTTCAGCCCCAAAAGGATAGTTGCCCTGGGGAAGCAGAGGATGGATATCGGGGAGCGCATGGCGGGGGAGATGAGGGATTTGATGGAGAAAGACGGTGCGGTGAAGGTAAGGAGCGTTCTGCATTTTGGGTCACTGAATAACGTTATGATGACCGTTTTTGGGAAAAGATATGATTTTGCGGGGAAGCCTGCTGCTGATCTTGATGACGGCTCTGCAGCGGAGGAGCTCGAGACATTGGTGAAAGAGGGTTACGAGCTGCTCGGAATGTTCAACTGGAGCGATCATCTGCCGCTCTTGGGTCGGTTTGATCTGCAGGGAGTGAGGAGGAGGTGTCGCAAGCTGGTAGGTAAGGTGAACTCCTTCGTCACTCGAATCATAGAGGACCACAGAATGAAGCGGGCGGCCGCCCATCCTGTAAGTCATGATGATAAGGCTGATCAGGACTTTGTCGATGTGCTTCTTGATCTGGAGGAGGGCGAGAAGCTTGCAGACTCGGATATGGTGGCCCTTCTTTGGGAAATGATATTCAGAGGAACTGACACAGTAGCAATCCTGATGGAATGGATTATGGCGAGAATGGTGCTTCATCCTGACATACAAGCTAAGGCTCAAGCTGAGATAGACGCTGCTACAGAGGGGAGCTCAAGGCCTGTTAGTGATTCTGACATCAAAAGTCTTCCTTATCTTCAGGCCATTGTGAAGGAAACCCTTCGAATGCATCCCCCGGGTCCTCTCCTTTCATGGGCTCGGATGGCAATCCATGACGTCCAAGTTGGAAATCATCTCATTCCTGCTGGAACTACCGCCATGGTCAACATGTGGGCAATAACTCACGACAAGAACATCTGGTCCGATCCCGACCAATTCAAGCCCGAGCGATTCACCGCCACAGATGACCGTATAGATGAGATCAATATATTAGGTTCTGATCTCAGGCTCGCACCATTTGGTTCGGGAAGGAGAGTCTGTCCCGGGAAAGCTATGGCATTGGCTGCTGTTCACCTCTGGTTTGCTCAGTTGCTTCAAAATTTCAAATGGCTGCCGGCTACGGCTTGTCCTGTTGACCTCTCTGAGTGCCTCAGGATGTCGCTCGAGATGAAAAATCCTTTGCTTTGCAGGGTTATACCAAGGCTTGAATAATTTATTATATTTATCATAAACATCGTCTTATAATTAATTATCATTCTTCGTCAT

Network for GWHGAAEX016775

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.21	p450	76	510	3.60E-82

Protein Sequence

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP78A5

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	Molecular Function	heme binding
GO:0005506	Molecular Function	iron ion binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.050
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	0.000
	SRR5643514	five period of Gastrodia elata	0.040
	SRR5643515	five period of Gastrodia elata	0.000
	SRR5643524	five period of Gastrodia elata	0.040
	SRR5643525	five period of Gastrodia elata	0.090
	SRR5643528	five period of Gastrodia elata	0.050
	SRR5643658	five period of Gastrodia elata	0.040
	SRR5643659	five period of Gastrodia elata	0.000
	SRR5643660	five period of Gastrodia elata	0.000
	SRR5643661	five period of Gastrodia elata	0.040
	SRR5643662	five period of Gastrodia elata	0.040
	SRR5643663	five period of Gastrodia elata	0.030
	SRR5643664	five period of Gastrodia elata	0.040
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.120
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.050
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.170
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.060
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.040
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.050
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.180
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.300
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.100
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.160
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.110
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.110
SRP279888	Gastro	Gastrodia elata tuber	0.00
	Juven	Juvenile tuber	0.00
	Mother_Gastro	Mother tuber of Gastrodia elata	0.00
	Mother_Juven	Mother tuber of Juvenile	0.02