Detail information of GWHGAAEX016781/evm.TU.scaffold_79.7


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|103487690|ref|YP_617251.1|2.00E-66glycerophosphoryl diester phosphodiesterase [Sphingopyxis alaskensis RB2256]
KOGKOG22580Glycerophosphoryl diester phosphodiesterase
nrgi|720006608|ref|XP_010258037.1|0PREDICTED: glycerophosphodiester phosphodiesterase GDPD6-like [Nelumbo nucifera]
Swissprottr|Q9SD81|GDPD6_ARATH0Glycerophosphodiester phosphodiesterase GDPD6 {ECO:0000305} (Precursor)
trEMBLtr|M0TCU0|M0TCU0_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P34970_001}
TAIRAT5G080300PLC-like phosphodiesterases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000082208343211401-
Transcript Sequence

Network for GWHGAAEX016781

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03009.16GDPD603678.50E-59
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K01126E3.1.4.46, glpQ, ugpQ Glycerophospholipid metabolism map00564

Gene Ontology

GO term OntologyName
GO:0006629Biological Processlipid metabolic process
GO:0008081Molecular Functionphosphoric diester hydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms32.920
SRR2545915Juvenile tuber12.900
SRP108465SRR5643513five period of Gastrodia elata20.760
SRR5643514five period of Gastrodia elata30.630
SRR5643515five period of Gastrodia elata25.930
SRR5643524five period of Gastrodia elata21.620
SRR5643525five period of Gastrodia elata59.920
SRR5643528five period of Gastrodia elata45.150
SRR5643658five period of Gastrodia elata57.890
SRR5643659five period of Gastrodia elata10.080
SRR5643660five period of Gastrodia elata11.780
SRR5643661five period of Gastrodia elata10.590
SRR5643662five period of Gastrodia elata15.840
SRR5643663five period of Gastrodia elata10.630
SRR5643664five period of Gastrodia elata14.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_164.810
SRR6049655Rhizomagastrodiae_C368-T10_good_172.510
SRR6049656Rhizomagastrodiae_C368-T07_good_154.140
SRR6049657Rhizomagastrodiae_C368-T07_good_130.350
SRR6049658Rhizomagastrodiae_C368-T04_good_164.990
SRR6049659Rhizomagastrodiae_C368-T04_good_170.600
SRR6049660Rhizomagastrodiae_C368-T01_good_132.140
SRR6049661Rhizomagastrodiae_C368-T04_good_145.300
SRR6049662Rhizomagastrodiae_C368-T01_good_197.760
SRR6049663Rhizomagastrodiae_C368-T01_good_169.720
SRR6049664Rhizomagastrodiae_C368-T10_good_1171.740
SRR6049665Rhizomagastrodiae_C368-T10_good_1171.740
SRP279888GastroGastrodia elata tuber 15.54
JuvenJuvenile tuber4.35
Mother_GastroMother tuber of Gastrodia elata 47.66
Mother_JuvenMother tuber of Juvenile 15.61