Detail information of GWHGAAEX016782/evm.TU.scaffold_79.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG24281.00E-127Uncharacterized conserved protein
nrgi|743864932|ref|XP_010904701.1|0PREDICTED: RNA polymerase-associated protein LEO1 [Elaeis guineensis]
trEMBLtr|M0TYU3|M0TYU3_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P09340_001}
TAIRAT5G61150_21.00E-127Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000082215509249781-
Transcript Sequence

Network for GWHGAAEX016782

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04004.12Leo12944521.10E-47
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006368Biological Processtranscription elongation from RNA polymerase II promoter
GO:0016570Biological Processhistone modification
GO:0016593Cellular ComponentCdc73/Paf1 complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms120.550
SRR2545915Juvenile tuber106.800
SRP108465SRR5643513five period of Gastrodia elata88.860
SRR5643514five period of Gastrodia elata74.610
SRR5643515five period of Gastrodia elata75.600
SRR5643524five period of Gastrodia elata70.350
SRR5643525five period of Gastrodia elata78.050
SRR5643528five period of Gastrodia elata68.310
SRR5643658five period of Gastrodia elata86.160
SRR5643659five period of Gastrodia elata83.980
SRR5643660five period of Gastrodia elata91.060
SRR5643661five period of Gastrodia elata80.940
SRR5643662five period of Gastrodia elata74.600
SRR5643663five period of Gastrodia elata78.050
SRR5643664five period of Gastrodia elata79.030
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1100.990
SRR6049655Rhizomagastrodiae_C368-T10_good_1104.440
SRR6049656Rhizomagastrodiae_C368-T07_good_188.130
SRR6049657Rhizomagastrodiae_C368-T07_good_1113.250
SRR6049658Rhizomagastrodiae_C368-T04_good_1115.480
SRR6049659Rhizomagastrodiae_C368-T04_good_1137.920
SRR6049660Rhizomagastrodiae_C368-T01_good_1106.770
SRR6049661Rhizomagastrodiae_C368-T04_good_1106.370
SRR6049662Rhizomagastrodiae_C368-T01_good_182.200
SRR6049663Rhizomagastrodiae_C368-T01_good_188.450
SRR6049664Rhizomagastrodiae_C368-T10_good_180.870
SRR6049665Rhizomagastrodiae_C368-T10_good_180.870
SRP279888GastroGastrodia elata tuber 95.55
JuvenJuvenile tuber158.80
Mother_GastroMother tuber of Gastrodia elata 81.07
Mother_JuvenMother tuber of Juvenile 141.05