Detail information of GWHGAAEX016787/evm.TU.scaffold_79.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17211.00E-22FOG: Zn-finger
nrgi|674961393|emb|CDX71799.1|1.17E-24BnaC08g30750D [Brassica napus]
Swissprottr|Q9M202|ZAT9_ARATH3.00E-23Zinc finger protein ZAT9
trEMBLtr|M0TCT2|M0TCT2_MUSAM2.00E-30Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P34890_001}
TAIRAT3G605801.00E-22C2H2-like zinc finger protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000082346421347468+
Transcript Sequence

Network for GWHGAAEX016787

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.5zf-C2H2_666885.10E-09
PF13912.5zf-C2H2_61611853.20E-12
PF13912.5zf-C2H2_62002242.40E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.620
SRR2545915Juvenile tuber4.620
SRP108465SRR5643513five period of Gastrodia elata1.780
SRR5643514five period of Gastrodia elata2.730
SRR5643515five period of Gastrodia elata2.770
SRR5643524five period of Gastrodia elata3.920
SRR5643525five period of Gastrodia elata20.820
SRR5643528five period of Gastrodia elata13.460
SRR5643658five period of Gastrodia elata39.780
SRR5643659five period of Gastrodia elata4.010
SRR5643660five period of Gastrodia elata3.100
SRR5643661five period of Gastrodia elata2.150
SRR5643662five period of Gastrodia elata4.010
SRR5643663five period of Gastrodia elata4.220
SRR5643664five period of Gastrodia elata7.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.330
SRR6049655Rhizomagastrodiae_C368-T10_good_18.640
SRR6049656Rhizomagastrodiae_C368-T07_good_12.990
SRR6049657Rhizomagastrodiae_C368-T07_good_13.010
SRR6049658Rhizomagastrodiae_C368-T04_good_11.750
SRR6049659Rhizomagastrodiae_C368-T04_good_12.400
SRR6049660Rhizomagastrodiae_C368-T01_good_11.710
SRR6049661Rhizomagastrodiae_C368-T04_good_13.590
SRR6049662Rhizomagastrodiae_C368-T01_good_12.870
SRR6049663Rhizomagastrodiae_C368-T01_good_11.270
SRR6049664Rhizomagastrodiae_C368-T10_good_13.030
SRR6049665Rhizomagastrodiae_C368-T10_good_13.030
SRP279888GastroGastrodia elata tuber 1.81
JuvenJuvenile tuber3.10
Mother_GastroMother tuber of Gastrodia elata 8.03
Mother_JuvenMother tuber of Juvenile 2.44