Detail information of GWHGAAEX016789/evm.TU.scaffold_79.16


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743891850|ref|XP_010911418.1|6.91E-58PREDICTED: probable WRKY transcription factor 57, partial [Elaeis guineensis]
Swissprottr|Q9C983|WRK57_ARATH7.00E-54Probable WRKY transcription factor 57
trEMBLtr|A0A068LI94|A0A068LI94_GOSHI1.00E-57WRKY transcription factor 33 {ECO:0000313|EMBL:AIE43867.1}
TAIRAT1G693102.00E-53WRKY DNA-binding protein 57

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000082408550415304-
Transcript Sequence

Network for GWHGAAEX016789

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03106.14WRKY1271833.30E-25
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.980
SRR2545915Juvenile tuber33.100
SRP108465SRR5643513five period of Gastrodia elata22.180
SRR5643514five period of Gastrodia elata11.870
SRR5643515five period of Gastrodia elata23.760
SRR5643524five period of Gastrodia elata12.270
SRR5643525five period of Gastrodia elata55.380
SRR5643528five period of Gastrodia elata53.420
SRR5643658five period of Gastrodia elata43.660
SRR5643659five period of Gastrodia elata48.670
SRR5643660five period of Gastrodia elata47.650
SRR5643661five period of Gastrodia elata58.570
SRR5643662five period of Gastrodia elata86.760
SRR5643663five period of Gastrodia elata66.570
SRR5643664five period of Gastrodia elata87.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.080
SRR6049655Rhizomagastrodiae_C368-T10_good_113.390
SRR6049656Rhizomagastrodiae_C368-T07_good_113.270
SRR6049657Rhizomagastrodiae_C368-T07_good_118.120
SRR6049658Rhizomagastrodiae_C368-T04_good_111.600
SRR6049659Rhizomagastrodiae_C368-T04_good_110.140
SRR6049660Rhizomagastrodiae_C368-T01_good_114.880
SRR6049661Rhizomagastrodiae_C368-T04_good_115.950
SRR6049662Rhizomagastrodiae_C368-T01_good_113.800
SRR6049663Rhizomagastrodiae_C368-T01_good_118.760
SRR6049664Rhizomagastrodiae_C368-T10_good_114.650
SRR6049665Rhizomagastrodiae_C368-T10_good_114.650
SRP279888GastroGastrodia elata tuber 53.50
JuvenJuvenile tuber24.13
Mother_GastroMother tuber of Gastrodia elata 122.13
Mother_JuvenMother tuber of Juvenile 49.73