Gene detail

Detail information of GWHGAAEX016790/evm.TU.scaffold_79.17

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672137995\|ref\|XP_008792738.1\|	1.90E-71	PREDICTED: paramyosin [Phoenix dactylifera]
trEMBL	tr\|D7SI51\|D7SI51_VITVI	5.00E-65	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI15161.3}
TAIR	AT5G07890	2.00E-43	myosin heavy chain-related

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000082	418376	435096	+

Transcript Sequence
>GWHTAAEX016790 CTTAAAGTCGATCTTCAACTGGGCCGCAAATTTATTCATAAGAAAAGCCGGCCCGTCAATTGTTAACCCCGATTCTTCCTCCGAACAGCCTCTCGCTCCCTCTCTCGTTCCTTGAAGACGCACACTGTTTCTACTGCTTTGCTTTTCTCATCATATTTTTCTCCGTTCGCTAGTTGAACTAAAATTTAAATGGATTCAAATTGTTCAACACCATCAGATTCTCGCCTGTGTGACAAGAAATGTATTAAACAACTAGAAAAGGAGCCAAGGAGCTGCTTTCTTGAAATAGGATGCCTTCAAGAACAGTTATGCTTATGCAGTATTGAAGCAAATTGTGTGGGTGACTATGTTCACAGCCTAGAAAAACTTGCAGGAGTGGGAATGTTGCAGGAGAAACTAAGGCTGTTAACTGAGGAATTAGTGCAATCTGATGACAAGTGCATTCAACTGTCACATGAAATTAAAACCAAAAATGAAAATTTAAGAAACTACGAAATGCAGATAGAGGATCTTGAAGCTATCATATCATCTACTGCATTGGAATCTCAGTGTGAGGTAGAGTACTTAAGACTTGATATGATTGCTTTGGAGGAGAGATGCTTTGAAGCTGAAAGTTCAAGCCAGCAAATGGTTCAGGACAAAGCTAAGATGAATGTGATCCTAGAGGAATATAAAATGCAGTTACAAGATGCACAGGATAGAATTATATTTTTCGAGTTGGAAAATGATGATCTAAAAGTAAAATTACAGGGAATTGAGAATAAATACAGAGGATTGCATTATAAAGTTGGAGAACATCTATCTAACTTACTCAAGGATGTTAGCAGCACAAGTAATAGCATGCGTAGAGAGCCTCATAAAAACCTTTTTTCTGGGCTCAACGAGAAGCATTTTTCATTAAAAGGAATCTGTTGTGAGGAAGTTTTGTGCCCACTGGTTTCAAAGCTTAGTCTCATTACAGTTTGGCTCGAGAATATTAAAGAGGAGATGCAGACAATGGGAAACAATATGCATGAATCTGAGATTCTTATCGAGAAGCTTAAGGAACAACTGAAGGAAGAAAAATTGAAGGCCAAGGAAGAAGCAGAAGACCTTACTCAAGCAATGGCTGAATTGAGGTATGAAATCCAAGGAAAGCTTGAGGATGAGTGTAAACGCCGGGTTTCTATTGAACAGGCCTCTCTTAGACGAATTGAAGATTTAGAGGAGCAGGTACACATTTTTCTAAGTTTTATTTTTCTTTGTATGCTTTATTAACCTGTATATATGATGAACGCAAACAGGTGACTGTAATTTCAATTCACGGTGTTTTTGAGAGTATTTATACTTGAACGCAGGTACAAAAGCAACAAAGAAAATTTCTTTCAGCTTTGATACTTTTACAACAAGCGCATAAGCTATCAGAAGCAAAAATTAAATGAAGTTCTGCTATCTGAGACGCAACATCAATTTCAAAATTTAGGAAAAGTACTAGAGGTTCGGTTCTTTTTATGTTGGCTTTAAGTGTAAAGCATATAATGTGTTTATGCAAGCTGATAAAAGAAAATGAGGTTTGTTTGCCTGCACTAGATGTGCAGTTCACATAATTGACTCATCATTTACTTATACACTTCATTTATATAGATCAGTTCTTAGACTAACCTGAATTGGATTACAAAATACAGTTTCCTTAATATTTACATTTACATAATTTGACAATTCATAAGCATATTACAACCAAACTTTATTCAACATGCAACATTGTATCATATGCTTTTCGGTGTAAATGCAAATTATATTTAGTTGCTTCTAAAGATTTGTGGTCTGATCTCTAATCTAAATAACCGTCTGCATAGGTTTCAAATGACTTTTTTTTCTAAAGCTTCAAAATATGGAAATATAAAAAAATGCTTGATATTCCACAACAAATTATAAAAACTTTCTTGGGAAAATAACAATGGTGCAAAATACCCGCTCAAAAAGTTAAAGTATTAATAATATTGCAGGAAAAGGGATAGAAGGGACAATCAAATATAGTACATGATTATAAGATTTAAGAATTTTCAGAATAATATCCACAACCATGTTTAGTGTTCTGGATCATCATAGGATTTTTTTTGAAACATGCACTCTTTTTTTTTCTTCCTGTGCAAATTATGTACATTTCTTGATCCTGTAACAGGTAAAGATAAGGTATTTTAAAACAGCCTGCCATGACCTAATTATTTTTATTTGAGGGGTTGAGCTAGCAGGAATGTTAAAAAGAACCAAACGGCATCATAATAATTTTAACTTTTTCAAATAAATATTTATTCTGTAGCAGTTTACGGACTGATAGTTCAATATTGGGTTTGATCATAAATCCTGGTAAGATGTTTGCTCAAGGAAAAAATTTATCATAAAGCTTGTTATGGAAAAAATTTACAAACAAGAAAACCTTACTGACCATCCTGTTTATAAAGCAAAAGTCTCATGTTTTGATCCTTGGGTCAATATCAGAGTTGTAAGGCGTATTTCAAGGTTTGATCCTAGGCATTCGAAGGATTGAGTTTGCAAAGCCCATTGATCAAAAACTTACCACTGTATGATTCTCTAATTTCAAAGGGTTAGTTGGTTAATTTAAACAATAATCATTCAATTTCAGTCTTGCAGGATTATACACACATTTACCCCGATTCAAGTCTTGGGAAGATTTAGTATTGGTTTTGTATTAAAACTGACCCGCACCCTCAGAAAATATGATTCAATATTAGTAGTAGTCGATAGATTCTCTAAAATAGCTTTTTTTTTTTAATGCTACAAAACTGCTGATGCATTTCATATCACCATGTTGTACTTGTTAAGGTGTGGAGGCTAATTGGATCACTAAAGGAGGTGCCGACGAAGTTCTTGTGGGTCCTGGGGGGTTCAGGGCAAGGTTACACTAGCCAACAGCAAGTCGGGGTGCCCAGGCGCGCCCTATAGAGGGCCTGTAGCCCGAGGAAGGGGAGCCCAGACGCCCGTGGAACAAGGAAGTGGGCGCCCAAGCGCCCGTCTAATAGAGAAGTGGGCGCTCAGAAGCCAGTGGTGGGTTAGACGCGAAAATAGGCGTATCGTGGGCAATTATGGGCGGTTTTGGGCTTGTTTTAAGGCATGTTGGAAGCCCTAATTTATAAAAAAAAGTGTGAGTGCCTCTTGAGATTAACAAAAAGTTCTTGGGAGAAGATTTGTGAGAGCATTTGAGAGGGTGTAGAAGAAAGACAAGTCTTGGGTGTGTTCCTAGGTGGAGTTTGTTATTTTTTTGTTCCTCCAAAGATTCAAGCTTTGATTTGTATTATGTAATATTGTATTTTTCATATAATAGATTTTTTATGGTGGTGTTCTCATTCTTAAGTTTTTCATATAAATTATTGTGTTTGGAA

Network for GWHGAAEX016790

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	12.460
SRP064423	SRR2545915	Juvenile tuber	8.820
SRP108465	SRR5643513	five period of Gastrodia elata	10.350
	SRR5643514	five period of Gastrodia elata	8.890
	SRR5643515	five period of Gastrodia elata	13.090
	SRR5643524	five period of Gastrodia elata	10.670
	SRR5643525	five period of Gastrodia elata	13.000
	SRR5643528	five period of Gastrodia elata	22.680
	SRR5643658	five period of Gastrodia elata	13.530
	SRR5643659	five period of Gastrodia elata	10.160
	SRR5643660	five period of Gastrodia elata	9.160
	SRR5643661	five period of Gastrodia elata	9.160
	SRR5643662	five period of Gastrodia elata	12.630
	SRR5643663	five period of Gastrodia elata	10.600
	SRR5643664	five period of Gastrodia elata	11.480
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.020
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.880
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	9.870
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	14.290
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	19.300
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	22.670
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	15.220
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	15.860
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.060
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.340
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	8.520
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	8.520
SRP279888	Gastro	Gastrodia elata tuber	12.59
	Juven	Juvenile tuber	13.21
	Mother_Gastro	Mother tuber of Gastrodia elata	43.86
	Mother_Juven	Mother tuber of Juvenile	39.74