Detail information of GWHGAAEX016791/evm.TU.scaffold_79.18


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262193553|ref|YP_003264762.1|1.00E-117glycogen/starch/alpha-glucan phosphorylase [Haliangium ochraceum DSM 14365]
KOGKOG20990Glycogen phosphorylase
nrgi|672197147|ref|XP_008776997.1|0PREDICTED: LOW QUALITY PROTEIN: alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic [Phoenix dactylifera]
Swissprottr|P27598|PHSL_IPOBA0Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic (Precursor)
trEMBLtr|B9SJB6|B9SJB6_RICCO0Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}
TAIRAT3G293200Glycosyl transferase, family 35

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000082438380506304-
Transcript Sequence

Network for GWHGAAEX016791

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00343.19Phosphorylase1664883.70E-130
PF00343.19Phosphorylase5549691.20E-165
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT35

KEGG pathway

KO Enzyme pathway mapID
K00688PYG, glgP Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500
Necroptosismap04217
Biofilm formation - Escherichia colimap02026
Insulin signaling pathwaymap04910
Glucagon signaling pathwaymap04922

Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0008184Molecular Functionglycogen phosphorylase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms147.650
SRR2545915Juvenile tuber204.150
SRP108465SRR5643513five period of Gastrodia elata93.920
SRR5643514five period of Gastrodia elata115.360
SRR5643515five period of Gastrodia elata104.570
SRR5643524five period of Gastrodia elata99.670
SRR5643525five period of Gastrodia elata73.660
SRR5643528five period of Gastrodia elata65.470
SRR5643658five period of Gastrodia elata67.560
SRR5643659five period of Gastrodia elata134.660
SRR5643660five period of Gastrodia elata143.480
SRR5643661five period of Gastrodia elata125.910
SRR5643662five period of Gastrodia elata298.100
SRR5643663five period of Gastrodia elata296.280
SRR5643664five period of Gastrodia elata275.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1104.780
SRR6049655Rhizomagastrodiae_C368-T10_good_182.280
SRR6049656Rhizomagastrodiae_C368-T07_good_1112.940
SRR6049657Rhizomagastrodiae_C368-T07_good_185.710
SRR6049658Rhizomagastrodiae_C368-T04_good_140.380
SRR6049659Rhizomagastrodiae_C368-T04_good_133.740
SRR6049660Rhizomagastrodiae_C368-T01_good_166.380
SRR6049661Rhizomagastrodiae_C368-T04_good_163.120
SRR6049662Rhizomagastrodiae_C368-T01_good_176.980
SRR6049663Rhizomagastrodiae_C368-T01_good_150.630
SRR6049664Rhizomagastrodiae_C368-T10_good_174.960
SRR6049665Rhizomagastrodiae_C368-T10_good_174.960
SRP279888GastroGastrodia elata tuber 170.85
JuvenJuvenile tuber115.38
Mother_GastroMother tuber of Gastrodia elata 27.93
Mother_JuvenMother tuber of Juvenile 39.87