Detail information of GWHGAAEX016792/evm.TU.scaffold_79.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG30659.00E-60SNAP-25 (synaptosome-associated protein) component of SNARE complex
nrgi|672199997|ref|XP_008777761.1|5.07E-70PREDICTED: SNAP25 homologous protein SNAP33-like [Phoenix dactylifera]
Swissprottr|Q9S7P9|SNP33_ARATH3.00E-60SNAP25 homologous protein SNAP33
trEMBLtr|A0A096SKS5|A0A096SKS5_MAIZE7.00E-67Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G153683_P01}
TAIRAT5G612109.00E-60soluble N-ethylmaleimide-sensitive factor adaptor protein 33

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000082515353517370+
Transcript Sequence

Network for GWHGAAEX016792

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K18211SNAP25 Insulin secretion map04911
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.120
SRR2545915Juvenile tuber0.410
SRP108465SRR5643513five period of Gastrodia elata8.040
SRR5643514five period of Gastrodia elata18.350
SRR5643515five period of Gastrodia elata8.720
SRR5643524five period of Gastrodia elata16.690
SRR5643525five period of Gastrodia elata0.380
SRR5643528five period of Gastrodia elata0.080
SRR5643658five period of Gastrodia elata0.060
SRR5643659five period of Gastrodia elata0.060
SRR5643660five period of Gastrodia elata0.210
SRR5643661five period of Gastrodia elata0.070
SRR5643662five period of Gastrodia elata0.210
SRR5643663five period of Gastrodia elata0.050
SRR5643664five period of Gastrodia elata0.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.690
SRR6049655Rhizomagastrodiae_C368-T10_good_117.840
SRR6049656Rhizomagastrodiae_C368-T07_good_19.020
SRR6049657Rhizomagastrodiae_C368-T07_good_16.280
SRR6049658Rhizomagastrodiae_C368-T04_good_17.780
SRR6049659Rhizomagastrodiae_C368-T04_good_19.410
SRR6049660Rhizomagastrodiae_C368-T01_good_17.710
SRR6049661Rhizomagastrodiae_C368-T04_good_17.350
SRR6049662Rhizomagastrodiae_C368-T01_good_19.650
SRR6049663Rhizomagastrodiae_C368-T01_good_112.850
SRR6049664Rhizomagastrodiae_C368-T10_good_114.280
SRR6049665Rhizomagastrodiae_C368-T10_good_114.280
SRP279888GastroGastrodia elata tuber 0.84
JuvenJuvenile tuber2.75
Mother_GastroMother tuber of Gastrodia elata 9.50
Mother_JuvenMother tuber of Juvenile 3.25