Gene detail

Detail information of GWHGAAEX016802/evm.TU.scaffold_79.29

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|71277763\|ref\|YP_270010.1\|	6.00E-97	serine protease [Colwellia psychrerythraea 34H]
nr	gi\|743778980\|ref\|XP_010919953.1\|	0	PREDICTED: subtilisin-like protease [Elaeis guineensis]
Swissprot	tr\|O65351\|SUBL_ARATH	1.00E-156	Subtilisin-like protease (Precursor)
trEMBL	tr\|B9RBY5\|B9RBY5_RICCO	0	Cucumisin, putative {ECO:0000313\|EMBL:EEF51056.1}
TAIR	AT5G67360	5.00E-156	Subtilase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000082	597855	600711	-

Transcript Sequence
>GWHTAAEX016802 AAGAAATGTAGAAACCCGGGCCAGGCTTACGTATAATTCGAGTCTGAGTCGGTTCAAACTTGAAATTGATTCGACCCGCTCTTCGAGAGTATGCAGCTCAAAAGGCCATAGACTCATAGCACCTTCTGCCATTAACTGAACATTTTATCATGCATAAATAGCACGAGAAGCAAGATTTTTACTTGGATTGCCATATAGGATGCTCCTCCTCTGCACAACATCGTATTCCACAATAAAAGCAATCACTCATGTCTATTTGCATATTATATATACATAGCTGCTATACGGTGAATGTATCTTTAGAAATTAGAATCAACGTGGAGGCCTTTATTCATGGCTGTTAGAAAAACCATCATCCTCATCTTCTTCTACTTCTTCATGTCCTTCTTATCGCTAGATGTACCCTCTCAAGTTTACTCGCAGGTCATCCCCATCAACGACGAAGGAGGCGGCATAGATGCCACGAAAACCCCAATATACATCGTTCACGTGGAGAAGCCCCCGCAGCGAGACCCCGTGCGGTCACTTCGTGTGCGCGACCTCAAGAACTGGTACATGTCCTTCCTCCCCAATGCCACCCTCTCCTCCGGCCAACCCCGCATGGTGTACACCTACCGTGAAGTCATCACGGGTTTCGCCGCCCGCCTCACTCCCGATGAAGCCGAGGCCATGGAACAGCTCGACGGCTTCATCGCAGCCTACCCCGAGGAAGAGCACTTCCCCTCGACCACCTACACCCCGACCTTCCTCACTTTGAGAGGCAAAGCGTCAAACACCCTCTGGTACGACTCCGCCATGGGAGCCGGCCAGATCATCGGCGTCATCGACGGCGGCATCGCCCCCAACCACCCCTCCTTCAAAGACAACGGCATGGCCCCTCCTCCCATCAAATGGAAGGGTAAGTGCTTCTGGGGCAACACCCCCACTTGCAACAACAAGCTCCTCGGCGCCGTTGGCTTCCGCAACGGCTTCTACGCCAACCCCTACGACAACGATGGCCACGGAACTCACGTGGCCAGCACCGCCGCCGGCAATTTCGCCAACAATGCCAGCGTGATCGGCCAAGCGCAGGGAACTGCCTCCGGCATGGCTCCCCGCGCCCACCTCGCCGTCTACAAAGTCTTGTTCTTAGGCCCGAAAGGCCATGCGGTGGGCACCTCCGCCGACATCTATGCTGGAATAGAGCAGGCCATCCGCGAGCGCGTCGACATTCTTCAGATGTCTCTCGGATCCTCCAAGCTCGACCTTTTCAACAGCCCCGTGGTCATCGGCTCTTTTGCAGCCATCACCAAGGGGATAGTCCCTTGTGCCGCATTCGCTAATGAGGGGCCCACCCAGAGCATTTTGGCTAATGACGCGCCCTGGGTGCTAACCGTTGGGGCGAGCACCGTCGACAGGAAGATCCTGGCTTCCGTGTTGCTTGGCAACGGCTCGGAGCTGATAGGAGAGTCGGCCAATCAGCCGGGAAACTTCCCTTCTGCTCAACTCCCCCTCGCCTTCCCGGGCGAGCAACTCAAGACAGTCGACTCCTTAGGCTGCCACCTGTCTGAGCTCAAGAAGCTCAACCTCCACGGGAAGATCGTGATGTGCTACCGCTTAGACATCGAGGACGATGAGCGTGGGCTAAATGTCGTGAGATCCGGCGGCGCCGGCATGATTCTGCTGAACCACTGGCAGGCGGGCCAGACGACCAATGCCTTCGCCCACGTGCTCCCCGCCGCCCACCTCAACAGCACCGGCTCTAAGCTCATAATCGATTACTATCGCCGCACGGCTGCAGGCGCCTCCACAGCGGCAATCGAATTTCGCGGGACACAATTTGGATTCGGCTCAGCCCCGGCGGTGGCGGTCTTCTCCTCGCGAGGCCCGAGCCTGGCCAACGGTGGGATCATCAAGCCAGACGTTATTGCCCCCGGGGTCAATATTCTCGCAGCATGGCCGAAGCCGGTCGGGCCCACCAAATCGATATTCAACTTCTTGAGCGGGACGTCCATGGCGACCCCGCACGTGTCTGGCATCGTTGCACTGCTCAAAAACAGGCACCCGAATTGGTCCCCGGCGGTGATCAAATCGGCAATCATGACCACAGCGTACGTGATGGACCGAGACGGAAACCCGATCACGGACGAGTACGATGGCGACGCAGCCACGGTGTTTGAACGAGGCTCTGGCCACATCGACCCGGAGGCAGCTGTGTCACCAGGGATTGTGTACGAGCTCAGCTACTACGACTATGTGCATTATTTGTGTGGGTACTACAAAGCAAACAACCCGGTGCAAATGATCATCAAGACGCCGGTGAACTGCGCACGGGTGAGAGCCGTAGCACCAGAGCAGCTCAATTATCCATCTTTCGGCGTGAGCCTCGGGGGGAACCAGTCGGCGGTGACTGTCAAAAGGGTGGCCACCAACGTAGGGGATGCTGGCTCGCTCTATATTGTCGATGTGCAGGAACCGGAAGGGGTAAAGGTTGAGGTCAGCCCAAGCTCAATACAGTTTAATGCCATAGGGGACAAAATGAGCTTTGATGTCAAGTTCAGTTTAAAGGGTGGCTTGCCAATGCCGGCGGCCGGCGAGGTCAAGGACGGCCGCCTGACTTGGGATTCCGGCAAGTATTATGCCTCCAGCCCTATTGCGGTTACTTTTGTTTGACAAGTTGTATAAGATCTAAAGATACTATGGCCTAACGACGGCCTAACAGATGTGAAACATAATTTTTAATTATCATCAAGAAAAATTAGAGGATACATGGATTGTAATTACTGTAAATAAAAATTATATAAGAGTA

Network for GWHGAAEX016802

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05922.15	Inhibitor_I9	49	126	2.30E-09
PF00082.21	Peptidase_S8	156	613	4.90E-47
PF02225.21	PA	399	468	2.30E-05

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006508	Biological Process	proteolysis
GO:0004252	Molecular Function	serine-type endopeptidase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	9.380
SRP064423	SRR2545915	Juvenile tuber	21.560
SRP108465	SRR5643513	five period of Gastrodia elata	10.510
	SRR5643514	five period of Gastrodia elata	20.560
	SRR5643515	five period of Gastrodia elata	20.110
	SRR5643524	five period of Gastrodia elata	34.070
	SRR5643525	five period of Gastrodia elata	6.000
	SRR5643528	five period of Gastrodia elata	0.610
	SRR5643658	five period of Gastrodia elata	13.190
	SRR5643659	five period of Gastrodia elata	1.430
	SRR5643660	five period of Gastrodia elata	0.460
	SRR5643661	five period of Gastrodia elata	0.370
	SRR5643662	five period of Gastrodia elata	0.290
	SRR5643663	five period of Gastrodia elata	0.760
	SRR5643664	five period of Gastrodia elata	0.360
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	22.650
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	33.230
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	34.570
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	26.730
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	12.860
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	10.040
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	25.540
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	33.130
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	15.620
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	9.910
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	21.870
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	21.870
SRP279888	Gastro	Gastrodia elata tuber	0.19
	Juven	Juvenile tuber	1.49
	Mother_Gastro	Mother tuber of Gastrodia elata	0.16
	Mother_Juven	Mother tuber of Juvenile	1.18