Gene detail

Detail information of GWHGAAEX016810/evm.TU.scaffold_79.39

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743791788\|ref\|XP_010923524.1\|	5.08E-120	PREDICTED: uncharacterized protein LOC105046590 isoform X3 [Elaeis guineensis]
trEMBL	tr\|A0A061ELS0\|A0A061ELS0_THECC	3.00E-115	Emb:CAB10253.1 isoform 5 {ECO:0000313\|EMBL:EOY05781.1}
TAIR	AT3G22810	4.00E-107	Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000082	831513	845724	-

Transcript Sequence
>GWHTAAEX016810 CGTGACCATAGAGGGGCATTTCCTAAGTTGCTTGCTGGTTTAGGGAGAGAAATTTTGTCCTGCTTGTTAAAAGAAGGAAAAACAGAGCAGCCTCGTTCTCAGTTGCTTGCTGCTCATCACAGAATGAACGGAGAAAGGGTGGAGTTGCCTCTGGACCCAATGGAGCTCCTTTCCCGCACTTGGAGCGCCTCCGCTCTCGACGTCCCACGAGCAATACTGTCTCCGGAGATCATTATGGAAGACTCTGCCTCCGAGGAGTTCTCCTTCGCCTCTGCGGCCACCTCTCAGCTTGTCTTGGACCGCATAATGTCTCACTCGCAGGAAGTGTCTCCTCTTACCTCCGGCCGCCTTTCCCACAGCAACGCTGGTTCGCTCTCCGACAGCCCGCCGGTTTCACCTTCCCAGCCGGATGACGTCAAGTTCGTGCGGGCAATCACTTCGGCGAGCAAGGCGGTGGCACTGCACCGGCCGGCTTCCTCCGGCGGGCGCACAGTTGGGAGGTGGCTGAAGGATCGGCGGGAGAAGAGGAAAGAAGAGGCGCGAGCGCATAAGGCGCAGCTGCACGCCGCCGTCTCCGTCGCCGGAGTTGCGGCGGCGGTGGCGGCTGTGGCGACGGAAGCGGCCTCGGTGCCGTCCGGACGGCATGATCGTGCCGTCCGCACGGGAATAGCCGTCGCCTCAGCTGCGACCCTCGTTGCCGCGCAGTGCGTGGACGCGGCCGAAGCAATGGGCGCCGATCGTGACCACCTCTCTGCCGTTATCTGCTCCGCCGTCAACGTCCGCACTCCGGGAGACATCGCCACCTTGACCGCAGCCGCAGCCACAGCATTGAGGGCAGCAGCGACTCTGAGGGCGAGGGCGCTAAGGGACGCTTGGAACATTGCTGCTGTAATTCCGGTAGAGAAGGGAGGAATATGCTCGCAGTTTGATCATCAAAAGCATCAGAAGAGCCCCGTGGCTGCTCAGAACCAAGAAGAAGATTTTCTGGAAAGCTTTAGTTTGGACCTTCTTTCCCGAGGCGCTGACTTGCTTAAGCGAACCCGGAAAGGTTCTCTTCACTGGAAGGTTGTTTCGGTTTATGTCAACAAGATGAACCAGGTGATGCTGAAGATGAAGAGCAAGCACATTGCGGGGACAATTACAAAGAAGAAGAAGAGTAGGCGTTTTTAATTTGATGCCAAAACTGCCAATTTTATGCTGAGATTCAGCAAAAGTGAAGCAAAAAAATTCGATTTTTGAGTGCAGGTGTGGTTGTGGAGGTGTGCAAAGAAGTGGCGGCATGGCCTGGCCGCCACTTGCTGGAAAACGGAGAGCAGAGGCGCTACTTCGGCTTGAGGACGGCTGAGGGCAGAGTCATAGAGTTTGAATGCAGAACCCACGGGGAGCACGAGATATGGACCCGCGGCATTTCCCGCCTCCTCCAAATTTCTTCGCATAATCGCTAGTGCTGCAGATATAGATCTTGTGCTTCTGTATGTGAAAATGGCTCCTTCCTCCTCTTAAATCAAACTGCTTGTTTTCTGTATCAAAAATATGATCAGAACTCTGGGTTTGATATATCATAATCTGTAAGAGGTTTTTGGCTTGAAGAGTTTGGAGTATGCCAGGTTTTATGCTAGCTAGAAACATCTCAATTTTGGATTTATTGGTTCAGTTCCTAAATTGGATGATTATGGTATTAAAAATACTTGGCATGCTGGATGAAGGAATGATAGAGATGAGGGTGTTGTTGTGCATGAACCATTAGAAGAGGTCGTCATGGTGTGATGAATGATGAGTTTTGTGCTTAATGCAATTTTAGTATCTTTATAACTAAAGTATTAAGTATTTTGGTGAGCGAATATGCTTTATGTTGTTATGTGATGGTTTGAACAAACAATTAATCCATTTAAAATGAATTGCGG

Network for GWHGAAEX016810

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05703.10	Auxin_canalis	7	262	1.50E-91
PF08458.9	PH_2	302	345	1.30E-15

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.630
SRP064423	SRR2545915	Juvenile tuber	5.460
SRP108465	SRR5643513	five period of Gastrodia elata	7.660
	SRR5643514	five period of Gastrodia elata	5.000
	SRR5643515	five period of Gastrodia elata	4.780
	SRR5643524	five period of Gastrodia elata	5.290
	SRR5643525	five period of Gastrodia elata	2.400
	SRR5643528	five period of Gastrodia elata	0.590
	SRR5643658	five period of Gastrodia elata	0.600
	SRR5643659	five period of Gastrodia elata	1.360
	SRR5643660	five period of Gastrodia elata	0.890
	SRR5643661	five period of Gastrodia elata	1.130
	SRR5643662	five period of Gastrodia elata	1.810
	SRR5643663	five period of Gastrodia elata	1.620
	SRR5643664	five period of Gastrodia elata	0.650
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.170
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.060
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	2.870
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.210
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.490
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.200
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.930
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.700
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.380
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	2.000
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.420
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.420
SRP279888	Gastro	Gastrodia elata tuber	1.80
	Juven	Juvenile tuber	4.39
	Mother_Gastro	Mother tuber of Gastrodia elata	0.72
	Mother_Juven	Mother tuber of Juvenile	1.59