Gene detail

Detail information of GWHGAAEX016815/evm.TU.scaffold_79.44

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1171	4.00E-115	Metallothionein-like protein
nr	gi\|743791854\|ref\|XP_010923540.1\|	0	PREDICTED: protein tesmin/TSO1-like CXC 2 [Elaeis guineensis]
Swissprot	tr\|Q9LUI3\|TSO1_ARATH	1.00E-115	CRC domain-containing protein TSO1
trEMBL	tr\|M0TS49\|M0TS49_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P20460_001}
TAIR	AT3G22780	4.00E-115	Tesmin/TSO1-like CXC domain-containing protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000082	916873	954727	-

Transcript Sequence
>GWHTAAEX016815 GGCAAATAGTGGAGGACAGTGGGCAGCAGAACTGCAAAAACGAGAAGGAAAAGCAACCAGAGGAGCCCGAGAGCAGAGGGAGAGAGATGCACTGAGAGATTGGACAAGAAATACGAGCTAAACCCAGGGATGTCGGAGAGCTCTCCGAGCTACGTCGAGATCGGATGAAATGGACACGCCGGAGAGGAGCAAGGTCATCAGCACGCCGATCTCGAAGTTCGAGGACTCTCCGGTGTTCAACTTCATCAATAATTTGTCTCCAATTCAACCTGTCAAGTCACTGCACAGTATACAGACATTTCATTCACCGTGTTCTGCAACTATATCTTCAGTCTTTTCTTCACCACATGTCAGTTTGCATAAGGAATCTAGATTTTTAATTAGGCACCCCTTTCCAGATCCAGTTAAACAGAAGGCCTATTCTGAAAATGTGATTGACAGCAACGCAAGATCTGGGGATCAGAATGAAACTGTACTTACTGCTTCCATTGTTCTTGCACAAGAAAATTGCAATATAAGTTGCTGTCTTAATGAGGCAAATGTCGACCCAGCTGATGAGAGCTCAACCCAATCTCATTTTTCTCAGTCTGCGCAATTTGATAATGGCAGTCCAAATCATAATACAACACCTTTCAATGGTGAGAAATTGGATTTTAAACTTGACATTAGCTGCACTTCATCAGAACGGGTTCAGTTTGCTCAGGATGTTTCAGAAAACAAACGAACTTCACTTACCGCTAAGATTGACCTTGAGGTTAAGTTTCCAGCCGATCAAATGAGGACAGATGCCTCTGGAAGTGACTGGGAGAACTTAATTTCTGATAACACTGATGATATGCTGATTTTGAATCCAGAAACTTGTTTGGAAGCTGGCAAGATTCAAGACAAGGACATGAAAATTTGCCAGAATGCACAGCCCATTACTTCTTGTGACCTTTGTATCCAGAATGTTTCTCAAAGTTCTCTTATGGATGAAGCAGGTGAAACTGGTGAACAACATCCTCCGGTTCACACACTCAAGTTATTTTCTACGGCTTGCCAGGAACAAGAAGTTGATTATCAAAATCAGAAAACTGAAGCTGAATCCAAGGATGACATGTCTTCAGATAGTAAGGTTGGTTCTCAGCAACTTCGTGGAGTGAGAAGGCGCTGCCTAGTATTTGAGGTGGCTGGTGTTTCTAAAAAACGCTTGCATAACAACTCAAATGTTCCTTCTATTAATTTGCCAATCAAATCAAAGTCTATGTCAGACAATCAACAACTTGTGCTTTCGAAGGCTACCAAAACTCCTGCCTCTTATGTTTTACCCGGTATTGGGTTACATTTGAATGCTCTTGCCAGAACGTCTAAGGATAGTCCAATTTCACAGAAAACTAAATCTCCTGGGAGAGAATTTATCATTAAGCCTTGCTCTGAACGCCCTTTTGCTCCTGCAGTAGCTAACGAGAAACGGCCATATAAGCTTTATAACAATCTCAAATTCCCAGATCTTAAGGGCAGTGAAGTTCAAGACAATCAAGCTGTGGATTCTGATGCTTCATTGGTGTCTGCACTTGGAAATGAAACATCAACTAGCCCTAAAAAAAAGAGGCGTAAGGCAGAACCTAGTGGTGAAAATGAAGGCTGCAAGCGATGCAACTGTAAGAAGTCTAAATGCTTAAAGCTATACTGTGAATGCTTTGCTGCCGGTGTGTATTGTGTTGAGTCATGCTCTTGTCAAGGATGCTTGAATAAACCAGTCCATGAAGAGGCTGTTCTTGCTACTCGCAAGCTGATTGAATCTCGTAATCCCCTTGCATTTGCCCCTAAAGTTATTCGAACATCTGAGAATGATCAGGATATTGGGGAAGAAAGCAACAAAACGCCAGCTTCTGCAAGGCATAAAAGGGGATGCAATTGCAAGAAGTCAAATTGCCTGAAGAAATACTGCGAGTGCTATCAGGGTGGTGTTGGATGCTCTTATTGCTGTCGATGTGAAGGTTGTAAAAATGCATTTGGAAAGAAAGAAGGATTTGGGCAAATTGAATATGAGGAACTTGAAAAGGAAAGTATTAAGTTGGATGATTGTAAAGCTAATGCCAATGTTTCAAATGTTCCAAAAATGGAACCTATTCAGTTATCGGAAAGCACTCTGCCCATCATATGCTTCCCTTCCAGCAGGTCTACAATCAAAATGCCATTTCTTTCGAACAGGAAATTTCCTCGGTCTTCCACTCTTTTGCAGACCAGCAGATCTGAAACTGAGCAAAAAGGAGAAGAAGAAGAAGACGATAACTCAGATGATTTAAAAGGTAAATCTTCACCTTGCGCTGCTGTGAAGACCGCCTCACCCAATGGGAAAAGAGTTTCATTGCCACTCAATGGCTTTGGGATGCCTCCAAATCTTAAGGGTGGCCGTAAATTGATCCTGAAATCTATCCCATCTTTTCCTTCCCTTACCACTGATGCCCCCATAGGCACTCAGTTCAACTCTTCTGTATTGAGTTGAGGAATTTAGTTTTACTGTCGAACTATGTAGCTTTTTTTTTTTTCATTCTTCTATATTCAACTCTTGTGTTTCCCCCTATCCATGAAGCTGCTTTTTATTGCAACTGTAATACCTTGAATGGTTGTGAGTTTTAAATGCGGATTACTATCTTCTAGTATCTGGATTGCTTTTAAGGTTTACTTCAAGTTTTGCCATCCTT

Network for GWHGAAEX016815

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03638.14	TCR	487	522	8.80E-12
PF03638.14	TCR	572	608	1.20E-09

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	CPP

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	25.730
SRP064423	SRR2545915	Juvenile tuber	13.390
SRP108465	SRR5643513	five period of Gastrodia elata	27.700
	SRR5643514	five period of Gastrodia elata	31.090
	SRR5643515	five period of Gastrodia elata	24.720
	SRR5643524	five period of Gastrodia elata	30.950
	SRR5643525	five period of Gastrodia elata	20.510
	SRR5643528	five period of Gastrodia elata	21.100
	SRR5643658	five period of Gastrodia elata	17.260
	SRR5643659	five period of Gastrodia elata	12.410
	SRR5643660	five period of Gastrodia elata	12.220
	SRR5643661	five period of Gastrodia elata	12.380
	SRR5643662	five period of Gastrodia elata	8.930
	SRR5643663	five period of Gastrodia elata	9.770
	SRR5643664	five period of Gastrodia elata	7.470
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	23.440
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	40.680
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	24.620
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	26.530
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	23.080
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	25.560
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	24.380
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	29.020
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	36.490
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	27.820
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	34.520
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	34.520
SRP279888	Gastro	Gastrodia elata tuber	13.00
	Juven	Juvenile tuber	28.59
	Mother_Gastro	Mother tuber of Gastrodia elata	45.27
	Mother_Juven	Mother tuber of Juvenile	36.52