Gene detail

Detail information of GWHGAAEX016818/CADD01323.1.gene

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000082	1043347	1047294	+

Transcript Sequence
>GWHTAAEX016818 TCTTTAAATTTTTGATTTTATCAAATAAATTCCTAAAATTATTAAAATATATCAAATAAGTTCTTCTAATTTTATTACCCTGAATTGAAAAATACATCAATTTGTCTCTTCAACCGAAATTCAACCTTTCTTCTTATTTGAAACCAAAGAAGTTCGGATATGCCAACATGATATCTTAATAACTTATCTGCCAAACCGCACTTTTAAAATAAGAACAGCAAACATCAGCACTCTGAAATTGCAACTAACGATGCAATAAGAGAGGTTGATGAGAAAAACAGAGGCATTGGCTTCTCAAGCGTTAAGAAATTATCAAAGCTTATGCTGTCAATCATCATCCGTTAGCAGCTCCATGGCTTCATCATCATCATAATCATCATCAAAATAAGTTTCGAATTTATAGGGAGTTTCAGTGTAAGAAACCCTTAATTGTTTGTACTTGTCGAAAACATTAAAGTTTTCAAAGCTTTTACTGTCAATCATCCGTTGAGAAGCCCGATCCTTTATCATATGTACTAAAGACATGTTGCATTTTATTACGAGAAGGCTGGCTTTTAAGCCACAATCATCCCCGGCATTGTCATTACTGTTGAAAATCCACGCAGGAAGCGATTTTGCTCTAAAATCAGTCCATTGGAGCATTCGCAGCGGATGCTGAAGCTTCACAAGCATAAGTCGTGGGCAGTCAGTAAGGATTAAGTCTTGAAGAGCCGGGAGTCTCGATATCCTCTCCAAATAGGGGGCGTATTCGATCGTGAGCTCTTCTAAACTGGTGAGGCTCTGCCCCACTTTGAGTCCCAGGTTGTAAGCCCTCTGGATTGATATTCTCTTCAAAGATTCAGCTGTGTGATGCAGGAGTTCTTCGGAAAGTGACTCGAGCTTGGCGCAGTCAACTATTTGCAGGATCTCCAAATGAGGCATCACTGGTATTGTCATCCCCAAACAGCTCCACTCCTCCCAGCTATACATGCTGTTAAAGTTCAAGTACCTCAAATTTGGCAAAAAAACAGTTTCATTATATGATGATGGCTTCATGACACCCTTTTCAGCTATGTTACTTTTATTACTGTTTGAGTAAAACTCTGGTCCGATACTTTTTATTGAATGAGCACGTTCAATGCTGAGTGCTTCCAAATTACTTAACAATCCAAGGCCGTCGAGCTGTTTACAATTGCTGCAGCTATAAATCGTCAAACGTACTAGCTGGCCAAGAAGATGGTTTGATGGCGCGCGTCCTAGCCAACTCGGGAGCTTCTGCCCACTATATCCGAAAATTCCAAGCTCAGCTCTGTTGGTGACTTCAATGCTGGAAGAATCACTTTCTGAGCATTCCAGTAAAAGATATTTCAGACACTTTTTCTCTCTTAGCGCGGCACATCTTGCTTGAGATTTATCAGAGACCCTTTCTAATTTGCTCAAAACCAAATGCCTGTAATGACCCTTTTTTATGCATACACACAAAAAAGTTGATGTGCAAAACTAGTTTCAGTATTGATAAAAAAGCCTGAGTTGCACGAGTCCCGCTAGTTCATTAATAGTTGATGATTCGTGTGCAGCATCTTCCGGTGGTACAACGAAGTCAAGAAATTGTAGCTTGTTTAACCTTAACAGCCCTGGTGGCAGGCAGTCCAATGCACTGTGAAAAGTTGTAAGAAAGCATAGCTGATGCAGCTTCATAATACATGAAGGCAGAGCGGTCAGGCTTTCACAGCCTTGAACCATAAGAGCTTTCAAAGATTTAAGATTTTCTATGGTTTGTGGCAGCTTCTTTATTGGTGTGTAAGATATATCTAGTAATTTAAGATGTGTGAGAATGCCTATGGTTACAGGCAGTTCTGTAACACTAGTTCTTCGGAGGGACAGTACCCTTAGAAAACGAAGCCGATTGAAAAGATCATCATCAAGTTTATCAAAGAGTTTATCAAAGGCCAAAAAAGTCCTCAATTTCACTTGCTCTTCTATACTTTTGGGGAGGGAGTTGGTTGTTGATGTTGTAGCTGTCATAATTTTGCTACAACCCCCGATTAATGAAAGGCGCCGCAGCTTCATTTGCCCTTCACTTGAATCCCTCCTTAGTATTTCCTTATCATTTAAGACTAGAGTATCATTTTGCATCAGAAAGTGAAACAAGGAGCGATAGAGGTCGTGCATTTTGAAAATGTCATCTCCAGCGTTACGTGGCTGAGGCATAAGAAGGTTCCTCTGCACCAAAAGCCTTAAATACCTTTCTCCAACTTCATAAGCTGTCAAATTGGTTTCTTCTTTAATGAAGCCCTCATGAATCCAGTATTCCAAAACAGTTGAATTATGGTAATACGAGTTAAAAGGAAATAAGGAGTAATATAGGAAGCATTGCTTGATATTTGCTGGCAAATACTGGTAGCTCACGTACAAGGCTGCGTGGATCTCAGGAGGGAGTCCGCTTACCTTCCACAAACTGTTCTTCAGAACAATCTCCCATGCTTCTCTTGTTTTGTTTTCCCCTAACAAGATCCCTCCTATGGCATTAATTGCCAATGGCAGACACTGACATTTTTCAACAAATTTCATGCCTACATCTTTGAGGTTCCATTTATCATTTATTGCTTCTTTCTGCTCCCAGGAGGGAAATGCCGACTTGCAGAGCAGCAGCCATCCATCGTCTGGAAGCAATGGCTTCATTTGATGGGAGTAAAATGCCATCATCTGTTTTGCCACTGCCATGTCTCTTGTGGTGACGAGAACCCTGCTGCCCCTTGCCGTGCTGCCCAGCAGCAAGCTTCTCAACAAGTCGTTCCATATCCTATTAGATTCTCAAATATCATCCAGCACCATAAATAGCCTTTTTCCTTGCACCATAGAACTTACATCCTTGCAGAGCAAGTTAAAATTTTGATGCCGACCGGTTTCATTAGATGCGAGGATGCTTGTCAAGATATCAGCCGGGCTGTAATTCTGGGTTACAGACACCCACTCCTTTACTTCAAAGCAGCTTTTGATTCTGTTATCATCAAACACTAATTTAGCCAGAGTGGTTTTGCCAATCCCTCCGGTTCCAACAATGGCATACACAAGTAGCTGGTTCTGATCCGTCTCCTGCACGGCTAATAATGATTCGATTAAGCGCCTGGCATCCTCGTGTATTCTACTGCCGACTATATCGGAACGGACCAGCGCATAATGCGTCTTGCGAGCGGACATGGGATCAAGGGCAGAGGAGGAGATTCGAGGAATGTCTGTAATGAGCTTTAAGATGGGTATTTGGCTAATGATTTCGTCCTTGATCTCTCGGTTCAGCTCCTGGATCTGAACGCTAATCCTGTGCTTGGATCGAGCCTTCTGGAAGCAGGACGACGGGAGAGGAAGACAAGGGCATACCTGTTTTCGGGCAGAAGATCGGCCTGCAGGGTGATCAACGGTCTTAAGTGAAGAAGAGGATGCCTTATCTCCATCGATCCCGCCGACATTGCGTTGCTCGTGATCGTCGAGCAGTTTCAGGTCGTACTCAGCGAGAACATCATCAATGTCGTACATGACGTCCTTGATTTTATTCAGCCAGAGATTAACGGAAGCTTCCCCGATGCTCCTGTCCTCGGCGTCTTGAAGGTAGAGTTTGAGCATCTCCAGAGTTTTTCGAAGAGTTTCCGCGGCGTTCCGCAATCCCATCTGCCTCGCTAACTCATCCTTTGCAATCTGGAGCAATGCTTCGCAGAGTTTCGAGACCAGGAAATCTGCCACTGCCGCCATCCTGATCGATCGCCTGCTCAAAACCTTTAGGTTTTCTTGCTACTGTACAAGAACGACGACTTATTGCGCAAAGTTTTATAGACAGAAATTGGGAAAGCTTTGGCTTGAAGTTGGTAGCAGCATTATCTCTTAAACACTCGATTAATTATATACTAAAGCAAATCGCTGATTAGTATATCTCCTAAACCCGTTAAAAGTCAAATAGGTTAAATTTAATTGATA

Network for GWHGAAEX016818

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX016818
SLNFFYQINSNYNISNKFFFYYPELKNTSICLFNRNSTFLLINQRSSDMPTYLNNLSAKPHFNKNSKHQHSEIATNDAIREVDEKNRGIGFSSVKKLSKLMLSIIIRQLHGFIIIIIIIKISFEFIGSFSVRNPLFVLVENIKVFKAFTVNHPLRSPILYHMYRHVAFYYEKAGFATIIPGIVITVENPRRKRFCSKISPLEHSQRMLKLHKHKSWAVSKDVLKSRESRYPLQIGGVFDRELFTGEALPHFESQVVSPLDYSLQRFSCVMQEFFGKLELGAVNYLQDLQMRHHWYCHPQTAPLLPAIHAVKVQVPQIWQKNSFIIWLHDTLFSYVTFITVVKLWSDTFYMSTFNAECFQITQSKAVELFTIAAAINRQTYLAKKMVWRASPTRELLPTISENSKLSSVGDFNAGRITFAFQKIFQTLFLSRGTSCLRFIRDPFFAQNQMPVMTLFYAYTQKSCAKLVSVLIKKPELHESRFINSFVCSIFRWYNEVKKLLVPQPWWQAVQCTVKSCKKALMQLHNTRQSGQAFTALNHKSFQRFKIFYGLWQLLYWCVRYIFKMCENAYGYRQFCNTSSSEGQYPKTKPIEKIIIKFIKEFIKGQKSPQFHLLFYTFGEGVGCCCSCHNFATTPDKAPQLHLPFTIPPYFLIIDSIILHQKVKQGAIEVVHFENVISSVTWLRHKKVPLHQKPIPFSNFISCQIGFFFNEALMNPVFQNSIMVIRVKRKGVIEALLDICWQILVAHVQGCVDLRRESAYLPQTVLQNNLPCFSCFVFPQDPSYGINCQWQTLTFFNKFHAYIFEVPFIIYCFFLLPGGKCRLAEQQPSIVWKQWLHLMGVKCHHLFCHCHVSCGDENPAAPCRAAQQQASQQVVPYPIRFSNIIQHHKPFSLHHRTYILAEQVKILMPTGFIRCEDACQDISRAVILGYRHPLLYFKAAFDSVIIKHFSQSGFANPSGSNNGIHKLVLIRLLHGFDAPGILVYSTADYIGTDQRIMRLASGHGIKGRGGDSRNVCNELDGYLANDFVLDLSVQLLDLNANPVLGSSLLEAGRRERKTRAYLFSGRRSACRVINGLKRRGCLISIDPADIALLVIVEQFQVVLSENIINVVHDVLDFIQPEINGSFPDAPVLGVLKVEFEHLQSFSKSFRGVPQSHLPRLILCNLEQCFAEFRDQEICHCRHPDRSPAQNLVFLLLYKNDDLLRKVLTEIGKALASWQHYLLNTRLIIYSKSLISISPKPVKSQIGILI

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	6.420
SRP064423	SRR2545915	Juvenile tuber	6.490
SRP108465	SRR5643513	five period of Gastrodia elata	10.350
	SRR5643514	five period of Gastrodia elata	7.180
	SRR5643515	five period of Gastrodia elata	8.100
	SRR5643524	five period of Gastrodia elata	8.370
	SRR5643525	five period of Gastrodia elata	22.400
	SRR5643528	five period of Gastrodia elata	13.370
	SRR5643658	five period of Gastrodia elata	28.690
	SRR5643659	five period of Gastrodia elata	3.990
	SRR5643660	five period of Gastrodia elata	10.610
	SRR5643661	five period of Gastrodia elata	4.800
	SRR5643662	five period of Gastrodia elata	4.400
	SRR5643663	five period of Gastrodia elata	4.550
	SRR5643664	five period of Gastrodia elata	2.970
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.830
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	7.310
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.490
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	9.060
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	13.580
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	16.210
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	9.000
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.500
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.990
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	7.290
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	5.400
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	5.400
SRP279888	Gastro	Gastrodia elata tuber	11.98
	Juven	Juvenile tuber	10.27
	Mother_Gastro	Mother tuber of Gastrodia elata	14.44
	Mother_Juven	Mother tuber of Juvenile	12.87