Gene detail

Detail information of GWHGAAEX016833/evm.TU.scaffold_79.65

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|393201235\|ref\|YP_006463077.1\|	3.00E-16	acetyltransferase, including N-acetylase of ribosomal protein [Solibacillus silvestris StLB046]
nr	gi\|672197746\|ref\|XP_008777144.1\|	9.56E-43	PREDICTED: uncharacterized protein LOC103697125 [Phoenix dactylifera]
trEMBL	tr\|V4LB15\|V4LB15_EUTSA	8.00E-40	Uncharacterized protein {ECO:0000313\|EMBL:ESQ47600.1}
TAIR	AT3G22560	1.00E-37	Acyl-CoA N-acyltransferases (NAT) superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000082	1272854	1274769	+

Transcript Sequence
>GWHTAAEX016833 GTTGTTATGGTAATCTGCAACTTCGGAGAGAGTAAATCCCTATTATAATTGTTTGTTAAATAATTTGGTCCTTTTTTTTTTTGCGTTCTACAATTCGTTGTTGGAAAACGCTGCTGGCTTTCTTTCCTTCCTTTACGATTGACAAAAGATGGAAACACTGCAAACCATCAGCAGTGGCGCTCCGCATCTCGAAAATCAGAGTCCGGTGATCTCTTTCCGGCCATTCCGACCCTCAAACAGCACCGATTTCAACGCGATCATGGATTTCGGAAGCGATCCACGCGTGAATCGCACTTTTCACTTCCATCTCTTCGCAGACGGCGAAGACGCCGCGCGATTCATCGAAACCGTCATCATCCCCCTCCGCTGGTTCCGATTCATCTGCCTCTCCGACGGCGACCGCCCGATCGGGTTCGTCACGTTCCGATCGGAAGATGCCGGAGGCGGAAGGCAGAGGATCGTAATTGGATACAGCGTTGTGCCGGAGTTTTGGGGAAGGGGAATCGCTACGAAGGCGGTGATGAAGGCGATGGCTGAAGCCTTTGAGATGTGGCCAGAGATTAAGAGATTCCAGGCTCTGGTGTTTCTGGATAATCCGGCGTCGCAAAGGGTTCTGGAGAAGGCCGGATTCCAGAAAGAGGCGGTGCTGAGGAAGTATATGCTTTCGAAGGGTGAAGCCAGAGATGTCGCTTTGTATAGTTTTATAGTTGCCGATTGAAGTTTTTTTGTTTTAAGGATGATTATTTCGTGAAGAGAGATGCTGAAGTTCTACATCTTGCCTTGCCGACGGAACTCAATGAGGAAGAAATCACGCAGGTAAAGCTTTTTTTTATAAGGCAAATATGTGTTCTGCGAGTTTTGAACTATATTCTATCATAAATTCAATCCAAACAACACACATTTCACAGAACATGTATTCCTGAGAGCTGGGGGTACTTGACCATTGAGTTAATTGGTTCGCTAGCTGCTTACGCTTGATTTTAAGTCAAATTTATCAATTACATATTTATTTTATATTTTAAATTCATCTAATTAAAAAAAATTATTTATATGAAAACAACTATATATGACATATTCATAAAGTAACGATGATAGATAGATAAATAAAATTCTTTAATAATCTTCTTTCTGAGAATATATCAATGTTATTATCTACAAATTTAAATATTTAAGAATATATTGCAAATTAGTAAGATGTATAACAAAATTTTCGAAGGAATATTAACGCCTAATATTGATATAGTCATTACCAACCCAACATCAAGTTGTAAAATTCATCTTAAGCATAACACAAGTGATTAGAATCGTAGCCATGTTCTGTCCCCAAGCATAATGAGGGGTTGAGACAATTAAATGGCTAATAATGCAGGTTCTTATAAAACTTCAATAATTGAATCTGGTAAGAGATTCTAAAACTATTCTCCATTAGTTGTAATTTCCTCATAATATTAGTTCAACTTGCTTATCATGGTCACTATCTTCTCCTGTGTTTAGATAATATTAATCTATGTTAAATCATCTATTTGTTTAGTAAGCTCGGCCACCACATGAAAGGAAAGTCAGAGCTACTCCCCTTTTGTATATCTTGTATCATGCCAATCTCATCAATTACATCCTCGACGATAAAGGCGGCCTCCGTGCTCTCTGGCACGATCATCATTGAAATAATTTCCTCAACCTCAATGACTGCCCACAAGACTTGAGGCCTAAGCCCAACTTCTTGCCTCGCAACTTTTCCTTATAAGTCCTACCACAAAGCATTACATTCGTCGATTTATGGCTTTTCAAAGATAATTTGATGTTGATATAACTAGAAGACTACGATGAATAGGTTTCAAAGGAATTGTGACAGAATTTAAGTGGTAAACACAAATGTTAAACCCTAAAAGTGCATGTAATAGAGTTTTAAAGAAGAA

Network for GWHGAAEX016833

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13302.6	Acetyltransf_3	26	162	6.70E-18

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	GNAT

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008080	Molecular Function	N-acetyltransferase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.940
SRP064423	SRR2545915	Juvenile tuber	3.980
SRP108465	SRR5643513	five period of Gastrodia elata	5.500
	SRR5643514	five period of Gastrodia elata	6.730
	SRR5643515	five period of Gastrodia elata	6.590
	SRR5643524	five period of Gastrodia elata	6.830
	SRR5643525	five period of Gastrodia elata	10.040
	SRR5643528	five period of Gastrodia elata	11.090
	SRR5643658	five period of Gastrodia elata	8.850
	SRR5643659	five period of Gastrodia elata	8.360
	SRR5643660	five period of Gastrodia elata	9.570
	SRR5643661	five period of Gastrodia elata	10.350
	SRR5643662	five period of Gastrodia elata	10.140
	SRR5643663	five period of Gastrodia elata	11.300
	SRR5643664	five period of Gastrodia elata	8.680
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.400
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.280
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.800
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.500
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.020
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.570
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.510
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.080
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.360
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.590
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	8.800
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	8.800
SRP279888	Gastro	Gastrodia elata tuber	6.78
	Juven	Juvenile tuber	2.49
	Mother_Gastro	Mother tuber of Gastrodia elata	7.97
	Mother_Juven	Mother tuber of Juvenile	3.48