Detail information of GWHGAAEX016834/evm.TU.scaffold_79.66


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG08022.00E-28E3 ubiquitin ligase
nrgi|672167241|ref|XP_008803574.1|1.62E-43PREDICTED: uncharacterized protein LOC103717101 [Phoenix dactylifera]
trEMBLtr|M0S487|M0S487_MUSAM5.00E-43Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P01460_001}
TAIRAT1G650402.00E-28RING/U-box superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008212763141281716-
Transcript Sequence

Network for GWHGAAEX016834

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.540
SRR2545915Juvenile tuber6.480
SRP108465SRR5643513five period of Gastrodia elata11.730
SRR5643514five period of Gastrodia elata12.500
SRR5643515five period of Gastrodia elata10.880
SRR5643524five period of Gastrodia elata10.890
SRR5643525five period of Gastrodia elata6.720
SRR5643528five period of Gastrodia elata6.220
SRR5643658five period of Gastrodia elata5.800
SRR5643659five period of Gastrodia elata12.710
SRR5643660five period of Gastrodia elata10.760
SRR5643661five period of Gastrodia elata7.450
SRR5643662five period of Gastrodia elata9.710
SRR5643663five period of Gastrodia elata10.960
SRR5643664five period of Gastrodia elata8.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.350
SRR6049655Rhizomagastrodiae_C368-T10_good_123.760
SRR6049656Rhizomagastrodiae_C368-T07_good_117.380
SRR6049657Rhizomagastrodiae_C368-T07_good_112.700
SRR6049658Rhizomagastrodiae_C368-T04_good_112.680
SRR6049659Rhizomagastrodiae_C368-T04_good_19.430
SRR6049660Rhizomagastrodiae_C368-T01_good_115.520
SRR6049661Rhizomagastrodiae_C368-T04_good_115.860
SRR6049662Rhizomagastrodiae_C368-T01_good_125.240
SRR6049663Rhizomagastrodiae_C368-T01_good_117.570
SRR6049664Rhizomagastrodiae_C368-T10_good_119.250
SRR6049665Rhizomagastrodiae_C368-T10_good_119.250
SRP279888GastroGastrodia elata tuber 11.51
JuvenJuvenile tuber12.55
Mother_GastroMother tuber of Gastrodia elata 7.74
Mother_JuvenMother tuber of Juvenile 10.15