Detail information of GWHGAAEX016839/evm.TU.scaffold_79.73


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428305230|ref|YP_007142055.1|5.00E-159folate/biopterin transporter [Crinalium epipsammum PCC 9333]
nrgi|743875404|ref|XP_010907329.1|0PREDICTED: folate-biopterin transporter 1, chloroplastic [Elaeis guineensis]
Swissprottr|Q9SKZ5|FBT1_ARATH0Folate-biopterin transporter 1, chloroplastic (Precursor)
trEMBLtr|A0A061EL38|A0A061EL38_THECC0Major facilitator superfamily protein isoform 1 {ECO:0000313|EMBL:EOY05715.1}
TAIRAT2G320400Major facilitator superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008213234571368657+
Transcript Sequence

Network for GWHGAAEX016839

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03092.15BT11022682.50E-52
PF03092.15BT12865094.20E-60
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.170
SRR2545915Juvenile tuber9.690
SRP108465SRR5643513five period of Gastrodia elata10.770
SRR5643514five period of Gastrodia elata10.110
SRR5643515five period of Gastrodia elata8.100
SRR5643524five period of Gastrodia elata9.120
SRR5643525five period of Gastrodia elata5.780
SRR5643528five period of Gastrodia elata5.550
SRR5643658five period of Gastrodia elata4.890
SRR5643659five period of Gastrodia elata10.610
SRR5643660five period of Gastrodia elata9.780
SRR5643661five period of Gastrodia elata10.520
SRR5643662five period of Gastrodia elata7.280
SRR5643663five period of Gastrodia elata9.200
SRR5643664five period of Gastrodia elata8.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.450
SRR6049655Rhizomagastrodiae_C368-T10_good_112.800
SRR6049656Rhizomagastrodiae_C368-T07_good_111.510
SRR6049657Rhizomagastrodiae_C368-T07_good_19.230
SRR6049658Rhizomagastrodiae_C368-T04_good_110.800
SRR6049659Rhizomagastrodiae_C368-T04_good_112.850
SRR6049660Rhizomagastrodiae_C368-T01_good_110.940
SRR6049661Rhizomagastrodiae_C368-T04_good_110.610
SRR6049662Rhizomagastrodiae_C368-T01_good_111.360
SRR6049663Rhizomagastrodiae_C368-T01_good_111.620
SRR6049664Rhizomagastrodiae_C368-T10_good_113.440
SRR6049665Rhizomagastrodiae_C368-T10_good_113.440
SRP279888GastroGastrodia elata tuber 11.22
JuvenJuvenile tuber12.61
Mother_GastroMother tuber of Gastrodia elata 9.30
Mother_JuvenMother tuber of Juvenile 8.94