Detail information of GWHGAAEX016862/evm.TU.scaffold_79.100
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502104|ref|YP_001957821.1| | 9.00E-38 | hypothetical protein Aasi_0703 [Candidatus Amoebophilus asiaticus 5a2] |
| KOG | KOG4177 | 5.00E-37 | Ankyrin |
| nr | gi|743880445|ref|XP_010908652.1| | 0 | PREDICTED: ankyrin repeat domain-containing protein 65-like [Elaeis guineensis] |
| Swissprot | tr|Q4JHE0|XB36_ORYSJ | 3.00E-14 | Probable E3 ubiquitin-protein ligase XBOS36 |
| trEMBL | tr|M5W4N7|M5W4N7_PRUPE | 0 | Uncharacterized protein {ECO:0000313|EMBL:EMJ04233.1} |
| TAIR | HS4502093 | 5.00E-37 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000082 | 1795217 | 1797353 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016862
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00635.25 | Motile_Sperm | 5 | 103 | 1.50E-05 |
| PF12796.6 | Ank_2 | 174 | 237 | 1.30E-06 |
| PF13637.5 | Ank_4 | 244 | 296 | 9.80E-10 |
| PF12796.6 | Ank_2 | 371 | 461 | 5.60E-14 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0005515 | Molecular Function | protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.180 |
| SRR2545915 | Juvenile tuber | 0.040 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 13.380 |
| SRR5643514 | five period of Gastrodia elata | 9.710 | |
| SRR5643515 | five period of Gastrodia elata | 4.810 | |
| SRR5643524 | five period of Gastrodia elata | 5.040 | |
| SRR5643525 | five period of Gastrodia elata | 1.890 | |
| SRR5643528 | five period of Gastrodia elata | 2.400 | |
| SRR5643658 | five period of Gastrodia elata | 1.750 | |
| SRR5643659 | five period of Gastrodia elata | 2.940 | |
| SRR5643660 | five period of Gastrodia elata | 2.960 | |
| SRR5643661 | five period of Gastrodia elata | 2.720 | |
| SRR5643662 | five period of Gastrodia elata | 5.620 | |
| SRR5643663 | five period of Gastrodia elata | 4.540 | |
| SRR5643664 | five period of Gastrodia elata | 12.610 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 10.720 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 18.950 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 16.130 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 5.580 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 13.410 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 8.110 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.980 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 9.430 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 11.820 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 7.870 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 31.700 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 31.700 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 8.05 |
| Juven | Juvenile tuber | 2.73 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 2.29 | |
| Mother_Juven | Mother tuber of Juvenile | 1.56 |