Gene detail

Detail information of GWHGAAEX016872/evm.TU.scaffold_79.113

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000082	2064960	2068220	-

Transcript Sequence
>GWHTAAEX016872 ATTATTTACTCTCAACACGGCCCGTTACATGAATAAAAAAATTCAAAGGGTTACAGCAGTGTCTCTGGGATCAAACCGCGTATTCAGCCATGGTGACGAGCGCGGGATGGCGGGATGTTTAGTATAGAGGGACTCCGTCAATCGCCATACAGGTGTATGATGATTCTTCTTGTTACTACCCATATTAAATGCGATCGATCTCAAGAAAGAGCAGAGGAACAAAAAGCGGCTGATTGACCGAGGCAGAAAAAGTGGGATTAAAGGAGTAGGAACATTTTAGGGAGACGTTCTTAAGAATGGGTGAAAGGTGCGGACAAGCTAATGAAGTAAAGGATGTAAAGGAGGAACTTTATATCAAAGTTAAAAGCAAGGAAAAGGAACCGACGATAGAAAAGCAAGAGAAGTTTGAAGTGGAGGTGAAGGCAAAATCTTTGGTAAAAGATAAGACTAAGCACAGTGAAGAAGATGAGAAGAAAAAGAATCATAAGGGGAAAAATGACAAGCTTGAGCTACAAGATAAGGAGGCGAAGGTGGAGGAGGAGACGAGAAATGAAAAGGTGGAGGTTCTGAAGAACAAGGATGGAGACCTTAAGGACAATGACAAAGAGAAGAAGGGAAAAAATGTAGATTCCAAATCGAAGAAAAATGATGAAGGGGACACAAAGAAAAAAGAAAAAAAAATGAAGGATAAAGAGGGGGAGTACATTAAAGATGATGATGCTGAAAAAGAGGAAGAACGTAAAAAGGATAAAAAGCACAAAGGAAAGAAAGACAAAAATGAGGAACAACCTGAAAAAATTGACTATGAAGAGGAGAAGAAAATGAGGACAGACAAAAAAAAAATTGAGAAAGGCGAAAATATGAAGAATGATGAAACTGAATGTCTGAAGAATGGCAACGAGAAGAAAAAGGAGGATGATAGAGGTTCCAAGATTAAGAAGGATGATGAGAGGGTCTCAAACAACAAAGATAAAGTAAAGAAGGCTGAAGAAAGGAAGCATAAAGACAATAATTCTGATGAAGAGAAGAAGGAAGGAAAGAAGAAAAAACTCAAGGGGAAAAAGAAAAAGCATGAGAGAAATGAAGAAGCCACTGAGGAGGAGGTTGATAAAAGGGAAAATGAGAAAACTGTGAAGAACGAAAAGAGTGATGATAAGGAATTAGGAAAAAAGCTTAAGAAGAAAGATGACAAGATTGAAGAGTGCAAGGCAAAGAAGGATGATGAAGGAAACCCAAAAATAATGGAAAAGATAGAAAAAAAAGCAAAGCTTAACGAAGAAGAAAAAGATAATGATGAAGTTGAAGAAAAGGTGAAGGACAAGAAGAAGAAGGATAAGAAAAAGAAAAAGAAAAAAGAAATTGAGGATTCAAGGATACATAATGATGATGATGCTAAGCCCAAAGATAAAGAAGAAGAAAAAGAGCATAGAGAAGGAAAAGAGAAGAATAAAATGAAGAGCAGGACCGACAATGAAGAATCAGAAGAAATGAGTTTGAATTTGCCTAAAGAATTACAGAAGAACAAAAACAGAAATGGCAAAGAAGAAAATGAGAATGAGAACAATAACGATAAAACTGTTAAGTCAAGGGAAGCTGGCGATGCAGAAGTTTTAAATGATTGGAAAGAAATAGTCAGCGATAAGGAAAATAACAGGGATCAATCCAAAGTGTCAAAGGATGACAAAGAAAGTGAGGGAAAGGAGACAGAGAAAGGCAGGAAACATAAAAATGGGAATAACAAAAAGAAGTCTACGGATCTTGGGAAGCTTAAACAGAAGCTAGAAAAGGTTGATGCCGAAATGGAAGAACTGCAGGCAAAAAATTTAGATATTTTGAGGATGATCAAAGAAGCTGAAGAGGCTAAAGTTAAAGAAATTGTGAAGGAAGACAATTTGGTTGAATCATGAGCATGATGATGAAAAAATAGGGGTAAGGTTGAAGTACCTAATCTTGAAATAATATATGTGCTGCAAAGTATACACTTCTAGTTTTATGGAAATAAACAGCTTTCTTTCATGTTACCTTTATTAGTTTTTCATGTAAATAATTTTCTGATTAGAATGAGAAAACTATTGTTTTTTTTTATGCGATGTTCTTATTTCTTTAGCAGCATACATGCTGCCACCTCAACATTTAATCAAGTCCTTAGGAACACACGCTTATATCACCCTGTATTCTTTAATTTTTCATAGTGCACAGTGTAGTTGCTGAGATACGCTCTCTTATTCCAGTTTTTTTTTTCCTGCTGATTCATTGTATCCGATGGTTTGGCAATGTAAGAGACTTTTTCTATGGATGCTGAATAGAGTTGCTACTGCAGCATCAATTGCACATAAATTGTTAAGAAGATCCTGATGCACATCATTTTTTATGTAAGGCCAATGTTTTATGGATTAGCAGAAAATATGAACATGTTAATTTTGAATTAAAAATTTCAAATGGTCAAATTACATGTGACTGATTTCAGACATTCTACTTATTTTTGAGGAATGAGATCATGTAAGTATGCTAATTTTTACATTTTCTTGACCTTGTTTTTTGTTTTCAAGCCAAAACAAAGGGAAACAATGGATCATAGTGTTCATCGCCAATGTATATTGGGTGCTGATCTACTATAATGACCCTAGGTCATTTAT

Network for GWHGAAEX016872

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	46.760
SRP064423	SRR2545915	Juvenile tuber	52.840
SRP108465	SRR5643513	five period of Gastrodia elata	92.190
	SRR5643514	five period of Gastrodia elata	65.440
	SRR5643515	five period of Gastrodia elata	96.120
	SRR5643524	five period of Gastrodia elata	74.740
	SRR5643525	five period of Gastrodia elata	144.170
	SRR5643528	five period of Gastrodia elata	80.610
	SRR5643658	five period of Gastrodia elata	80.920
	SRR5643659	five period of Gastrodia elata	68.210
	SRR5643660	five period of Gastrodia elata	62.980
	SRR5643661	five period of Gastrodia elata	75.020
	SRR5643662	five period of Gastrodia elata	73.890
	SRR5643663	five period of Gastrodia elata	70.650
	SRR5643664	five period of Gastrodia elata	82.620
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	81.950
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	112.280
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	81.720
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	88.720
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	98.020
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	102.520
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	95.670
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	86.120
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	63.670
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	87.450
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	78.260
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	78.260
SRP279888	Gastro	Gastrodia elata tuber	43.38
	Juven	Juvenile tuber	44.57
	Mother_Gastro	Mother tuber of Gastrodia elata	52.32
	Mother_Juven	Mother tuber of Juvenile	65.46