Detail information of GWHGAAEX016877/evm.TU.scaffold_79.119


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428320931|ref|YP_007118813.1|6.00E-24putative signal transduction protein with EFhand domain [Oscillatoria nigro-viridis PCC 7112]
KOGKOG00321.00E-116Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nrgi|743880467|ref|XP_010908659.1|4.90E-129PREDICTED: calcium-dependent protein kinase 1-like isoform X1 [Elaeis guineensis]
Swissprottr|Q06850|CDPK1_ARATH4.00E-117Calcium-dependent protein kinase 1
trEMBLtr|V4U4L9|V4U4L9_9ROSI1.00E-120Uncharacterized protein {ECO:0000313|EMBL:ESR59045.1}
TAIRAT5G048701.00E-116calcium dependent protein kinase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008221288252143412+
Transcript Sequence

Network for GWHGAAEX016877

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13499.5EF-hand_7691296.70E-11
PF13499.5EF-hand_71401991.20E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.490
SRR2545915Juvenile tuber5.250
SRP108465SRR5643513five period of Gastrodia elata4.020
SRR5643514five period of Gastrodia elata2.570
SRR5643515five period of Gastrodia elata3.310
SRR5643524five period of Gastrodia elata5.070
SRR5643525five period of Gastrodia elata2.230
SRR5643528five period of Gastrodia elata2.670
SRR5643658five period of Gastrodia elata2.840
SRR5643659five period of Gastrodia elata2.380
SRR5643660five period of Gastrodia elata4.820
SRR5643661five period of Gastrodia elata5.860
SRR5643662five period of Gastrodia elata3.480
SRR5643663five period of Gastrodia elata0.950
SRR5643664five period of Gastrodia elata2.560
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.500
SRR6049655Rhizomagastrodiae_C368-T10_good_12.690
SRR6049656Rhizomagastrodiae_C368-T07_good_13.310
SRR6049657Rhizomagastrodiae_C368-T07_good_12.330
SRR6049658Rhizomagastrodiae_C368-T04_good_11.960
SRR6049659Rhizomagastrodiae_C368-T04_good_12.140
SRR6049660Rhizomagastrodiae_C368-T01_good_12.700
SRR6049661Rhizomagastrodiae_C368-T04_good_13.160
SRR6049662Rhizomagastrodiae_C368-T01_good_12.490
SRR6049663Rhizomagastrodiae_C368-T01_good_13.230
SRR6049664Rhizomagastrodiae_C368-T10_good_12.540
SRR6049665Rhizomagastrodiae_C368-T10_good_12.540
SRP279888GastroGastrodia elata tuber 3.97
JuvenJuvenile tuber4.88
Mother_GastroMother tuber of Gastrodia elata 5.38
Mother_JuvenMother tuber of Juvenile 6.36