Detail information of GWHGAAEX016882/evm.TU.scaffold_79.124


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108802877|ref|YP_642814.1|2.00E-30serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
KOGKOG00320Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nrgi|156072390|gb|ABU45516.1|0calcium-dependent protein kinase 1 [Phalaenopsis amabilis]
Swissprottr|Q06850|CDPK1_ARATH0Calcium-dependent protein kinase 1
trEMBLtr|B2KL91|B2KL91_PHAAB0Calcium-dependent protein kinase 1 {ECO:0000313|EMBL:ABU45516.1}
TAIRAT5G048700calcium dependent protein kinase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008221752322181278-
Transcript Sequence

Network for GWHGAAEX016882

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase1083661.50E-73
PF13499.5EF-hand_74144731.80E-08
PF13499.5EF-hand_74845454.10E-11
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms40.870
SRR2545915Juvenile tuber43.010
SRP108465SRR5643513five period of Gastrodia elata44.950
SRR5643514five period of Gastrodia elata38.790
SRR5643515five period of Gastrodia elata96.880
SRR5643524five period of Gastrodia elata54.390
SRR5643525five period of Gastrodia elata99.710
SRR5643528five period of Gastrodia elata119.820
SRR5643658five period of Gastrodia elata58.950
SRR5643659five period of Gastrodia elata86.890
SRR5643660five period of Gastrodia elata58.930
SRR5643661five period of Gastrodia elata84.740
SRR5643662five period of Gastrodia elata92.340
SRR5643663five period of Gastrodia elata60.390
SRR5643664five period of Gastrodia elata98.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_141.450
SRR6049655Rhizomagastrodiae_C368-T10_good_131.800
SRR6049656Rhizomagastrodiae_C368-T07_good_141.720
SRR6049657Rhizomagastrodiae_C368-T07_good_138.820
SRR6049658Rhizomagastrodiae_C368-T04_good_129.670
SRR6049659Rhizomagastrodiae_C368-T04_good_135.250
SRR6049660Rhizomagastrodiae_C368-T01_good_164.220
SRR6049661Rhizomagastrodiae_C368-T04_good_134.770
SRR6049662Rhizomagastrodiae_C368-T01_good_147.270
SRR6049663Rhizomagastrodiae_C368-T01_good_180.760
SRR6049664Rhizomagastrodiae_C368-T10_good_134.800
SRR6049665Rhizomagastrodiae_C368-T10_good_134.800
SRP279888GastroGastrodia elata tuber 34.89
JuvenJuvenile tuber28.24
Mother_GastroMother tuber of Gastrodia elata 168.01
Mother_JuvenMother tuber of Juvenile 79.03