Detail information of GWHGAAEX016890/evm.TU.scaffold_79.132
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|15838930|ref|NP_299618.1| | 2.00E-58 | molecular chaperone DnaJ [Xylella fastidiosa 9a5c] |
| KOG | KOG0712 | 0 | Molecular chaperone (DnaJ superfamily) |
| nr | gi|565400310|ref|XP_006365673.1| | 0 | PREDICTED: dnaJ protein homolog isoform X2 [Solanum tuberosum] |
| Swissprot | tr|Q04960|DNJH_CUCSA | 0 | DnaJ protein homolog (Precursor) |
| trEMBL | tr|M0ZPC7|M0ZPC7_SOLTU | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400005019} |
| TAIR | AT3G44110 | 0 | DNAJ homologue 3 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000082 | 2344079 | 2345641 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX016890
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00226.30 | DnaJ | 14 | 71 | 1.20E-22 |
| PF01556.17 | DnaJ_C | 121 | 342 | 1.50E-39 |
| PF00684.18 | DnaJ_CXXCXGXG | 147 | 213 | 8.70E-15 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K09503 | DNAJA2 | Protein processing in endoplasmic reticulum | map04141 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006457 | Biological Process | protein folding |
| GO:0009408 | Biological Process | response to heat |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0031072 | Molecular Function | heat shock protein binding |
| GO:0051082 | Molecular Function | unfolded protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 54.980 |
| SRR2545915 | Juvenile tuber | 269.010 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 19.400 |
| SRR5643514 | five period of Gastrodia elata | 20.820 | |
| SRR5643515 | five period of Gastrodia elata | 37.970 | |
| SRR5643524 | five period of Gastrodia elata | 16.500 | |
| SRR5643525 | five period of Gastrodia elata | 334.010 | |
| SRR5643528 | five period of Gastrodia elata | 317.030 | |
| SRR5643658 | five period of Gastrodia elata | 47.220 | |
| SRR5643659 | five period of Gastrodia elata | 62.040 | |
| SRR5643660 | five period of Gastrodia elata | 41.110 | |
| SRR5643661 | five period of Gastrodia elata | 44.080 | |
| SRR5643662 | five period of Gastrodia elata | 78.270 | |
| SRR5643663 | five period of Gastrodia elata | 77.920 | |
| SRR5643664 | five period of Gastrodia elata | 286.520 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 145.110 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 59.550 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 111.250 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 105.230 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 77.350 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 82.670 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 108.320 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 96.070 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 127.100 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 143.010 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 90.300 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 90.300 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 44.53 |
| Juven | Juvenile tuber | 19.22 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 148.09 | |
| Mother_Juven | Mother tuber of Juvenile | 57.38 |