Detail information of GWHGAAEX016893/evm.TU.scaffold_79.135


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|384216710|ref|YP_005607876.1|3.00E-69hypothetical protein BJ6T_30120 [Bradyrhizobium japonicum USDA 6]
KOGKOG28522.00E-152Possible oxidoreductase
nrgi|566169785|ref|XP_002306237.2|9.00E-161FAD-dependent oxidoreductase family protein [Populus trichocarpa]
trEMBLtr|B9H462|B9H462_POPTR3.00E-161FAD-dependent oxidoreductase family protein {ECO:0000313|EMBL:EEE93233.2}
TAIRAT5G672902.00E-152FAD-dependent oxidoreductase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008223655932367637-
Transcript Sequence

Network for GWHGAAEX016893

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01266.23DAO143591.40E-55
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.830
SRR2545915Juvenile tuber7.480
SRP108465SRR5643513five period of Gastrodia elata36.540
SRR5643514five period of Gastrodia elata28.320
SRR5643515five period of Gastrodia elata24.440
SRR5643524five period of Gastrodia elata29.590
SRR5643525five period of Gastrodia elata55.010
SRR5643528five period of Gastrodia elata35.540
SRR5643658five period of Gastrodia elata42.350
SRR5643659five period of Gastrodia elata24.010
SRR5643660five period of Gastrodia elata23.700
SRR5643661five period of Gastrodia elata27.810
SRR5643662five period of Gastrodia elata33.740
SRR5643663five period of Gastrodia elata25.210
SRR5643664five period of Gastrodia elata32.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_137.580
SRR6049655Rhizomagastrodiae_C368-T10_good_134.470
SRR6049656Rhizomagastrodiae_C368-T07_good_132.340
SRR6049657Rhizomagastrodiae_C368-T07_good_137.130
SRR6049658Rhizomagastrodiae_C368-T04_good_142.760
SRR6049659Rhizomagastrodiae_C368-T04_good_152.700
SRR6049660Rhizomagastrodiae_C368-T01_good_135.650
SRR6049661Rhizomagastrodiae_C368-T04_good_142.170
SRR6049662Rhizomagastrodiae_C368-T01_good_130.790
SRR6049663Rhizomagastrodiae_C368-T01_good_133.920
SRR6049664Rhizomagastrodiae_C368-T10_good_135.650
SRR6049665Rhizomagastrodiae_C368-T10_good_135.650
SRP279888GastroGastrodia elata tuber 35.12
JuvenJuvenile tuber34.24
Mother_GastroMother tuber of Gastrodia elata 52.17
Mother_JuvenMother tuber of Juvenile 46.70