Detail information of GWHGAAEX016896/evm.TU.scaffold_79.139


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672128627|ref|XP_008787807.1|8.48E-172PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Phoenix dactylifera]
Swissprottr|Q689D6|RPD1_ARATH2.00E-26Protein ROOT PRIMORDIUM DEFECTIVE 1
trEMBLtr|Q10G25|Q10G25_ORYSJ1.00E-131Os03g0646200 protein {ECO:0000313|EMBL:BAF12681.1}
TAIRAT1G718501.00E-97Ubiquitin carboxyl-terminal hydrolase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008225276492529157+
Transcript Sequence

Network for GWHGAAEX016896

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF11955.7PORR383759.10E-101
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.580
SRR2545915Juvenile tuber17.010
SRP108465SRR5643513five period of Gastrodia elata12.900
SRR5643514five period of Gastrodia elata9.310
SRR5643515five period of Gastrodia elata10.150
SRR5643524five period of Gastrodia elata10.290
SRR5643525five period of Gastrodia elata11.590
SRR5643528five period of Gastrodia elata11.150
SRR5643658five period of Gastrodia elata11.620
SRR5643659five period of Gastrodia elata17.050
SRR5643660five period of Gastrodia elata19.190
SRR5643661five period of Gastrodia elata16.390
SRR5643662five period of Gastrodia elata17.680
SRR5643663five period of Gastrodia elata14.910
SRR5643664five period of Gastrodia elata15.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.020
SRR6049655Rhizomagastrodiae_C368-T10_good_114.730
SRR6049656Rhizomagastrodiae_C368-T07_good_116.560
SRR6049657Rhizomagastrodiae_C368-T07_good_119.670
SRR6049658Rhizomagastrodiae_C368-T04_good_117.980
SRR6049659Rhizomagastrodiae_C368-T04_good_121.210
SRR6049660Rhizomagastrodiae_C368-T01_good_120.630
SRR6049661Rhizomagastrodiae_C368-T04_good_122.150
SRR6049662Rhizomagastrodiae_C368-T01_good_120.260
SRR6049663Rhizomagastrodiae_C368-T01_good_122.420
SRR6049664Rhizomagastrodiae_C368-T10_good_114.590
SRR6049665Rhizomagastrodiae_C368-T10_good_114.590
SRP279888GastroGastrodia elata tuber 15.57
JuvenJuvenile tuber27.08
Mother_GastroMother tuber of Gastrodia elata 7.83
Mother_JuvenMother tuber of Juvenile 11.46