Detail information of GWHGAAEX016898/evm.TU.scaffold_79.141


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|297565110|ref|YP_003684082.1|7.00E-13Kelch repeat-containing protein [Meiothermus silvanus DSM 9946]
KOGKOG10723.00E-159FOG: Kelch repeat
nrgi|672184510|ref|XP_008812564.1|0PREDICTED: F-box/kelch-repeat protein At1g30090-like [Phoenix dactylifera]
Swissprottr|Q9C6Z0|FBK17_ARATH9.00E-160F-box/kelch-repeat protein At1g30090
trEMBLtr|M0TBR4|M0TBR4_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P31190_001}
TAIRAT1G300903.00E-159Galactose oxidase/kelch repeat superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008226238032625833+
Transcript Sequence

Network for GWHGAAEX016898

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00646.32F-box51887.70E-05
PF01344.24Kelch_11932383.40E-10
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.920
SRR2545915Juvenile tuber2.880
SRP108465SRR5643513five period of Gastrodia elata12.950
SRR5643514five period of Gastrodia elata16.900
SRR5643515five period of Gastrodia elata16.440
SRR5643524five period of Gastrodia elata16.000
SRR5643525five period of Gastrodia elata11.880
SRR5643528five period of Gastrodia elata12.480
SRR5643658five period of Gastrodia elata16.430
SRR5643659five period of Gastrodia elata15.090
SRR5643660five period of Gastrodia elata10.570
SRR5643661five period of Gastrodia elata15.770
SRR5643662five period of Gastrodia elata16.970
SRR5643663five period of Gastrodia elata13.760
SRR5643664five period of Gastrodia elata18.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.980
SRR6049655Rhizomagastrodiae_C368-T10_good_19.950
SRR6049656Rhizomagastrodiae_C368-T07_good_112.000
SRR6049657Rhizomagastrodiae_C368-T07_good_111.460
SRR6049658Rhizomagastrodiae_C368-T04_good_110.770
SRR6049659Rhizomagastrodiae_C368-T04_good_113.190
SRR6049660Rhizomagastrodiae_C368-T01_good_111.540
SRR6049661Rhizomagastrodiae_C368-T04_good_18.850
SRR6049662Rhizomagastrodiae_C368-T01_good_18.830
SRR6049663Rhizomagastrodiae_C368-T01_good_111.670
SRR6049664Rhizomagastrodiae_C368-T10_good_116.430
SRR6049665Rhizomagastrodiae_C368-T10_good_116.430
SRP279888GastroGastrodia elata tuber 12.86
JuvenJuvenile tuber19.34
Mother_GastroMother tuber of Gastrodia elata 13.62
Mother_JuvenMother tuber of Juvenile 14.84