Detail information of GWHGAAEX016899/evm.TU.scaffold_79.143


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695057558|ref|XP_009417059.1|1.84E-19PREDICTED: protein TIFY 5A-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q8LBM2|TIF5A_ARATH6.00E-16Protein TIFY 5A
trEMBLtr|M0TZ43|M0TZ43_MUSAM7.00E-20Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P10340_001}
TAIRAT2G346003.00E-09jasmonate-zim-domain protein 7

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008226457752646355+
Transcript Sequence

Network for GWHGAAEX016899

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06200.13tify19476.40E-11
PF09425.9CCT_268903.60E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTify

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.730
SRR2545915Juvenile tuber24.380
SRP108465SRR5643513five period of Gastrodia elata78.520
SRR5643514five period of Gastrodia elata34.570
SRR5643515five period of Gastrodia elata292.610
SRR5643524five period of Gastrodia elata66.710
SRR5643525five period of Gastrodia elata76.330
SRR5643528five period of Gastrodia elata172.190
SRR5643658five period of Gastrodia elata40.610
SRR5643659five period of Gastrodia elata94.390
SRR5643660five period of Gastrodia elata16.860
SRR5643661five period of Gastrodia elata44.650
SRR5643662five period of Gastrodia elata108.160
SRR5643663five period of Gastrodia elata50.570
SRR5643664five period of Gastrodia elata84.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.500
SRR6049655Rhizomagastrodiae_C368-T10_good_132.300
SRR6049656Rhizomagastrodiae_C368-T07_good_19.050
SRR6049657Rhizomagastrodiae_C368-T07_good_110.070
SRR6049658Rhizomagastrodiae_C368-T04_good_16.560
SRR6049659Rhizomagastrodiae_C368-T04_good_112.210
SRR6049660Rhizomagastrodiae_C368-T01_good_127.090
SRR6049661Rhizomagastrodiae_C368-T04_good_15.510
SRR6049662Rhizomagastrodiae_C368-T01_good_127.670
SRR6049663Rhizomagastrodiae_C368-T01_good_155.720
SRR6049664Rhizomagastrodiae_C368-T10_good_127.620
SRR6049665Rhizomagastrodiae_C368-T10_good_127.620
SRP279888GastroGastrodia elata tuber 11.59
JuvenJuvenile tuber15.13
Mother_GastroMother tuber of Gastrodia elata 409.58
Mother_JuvenMother tuber of Juvenile 228.29